Table 2.

A. pleuropneumoniae S4074 genes of interest that were differentially expressed in biofilms

Locus tag	Gene	Conditions
		4 h-static biofilm		6 h-static biofilm		4 h vs 6 h static biofilms		Drip-flow biofilm
		Up	Down	Up	Down	Up	Down	Up	Down
APL_0048	arcA						√
APL_0049							√
APL_0189	dus		√				√	√
APL_0234									√
APL_0236							√		√
APL_0330							√		√
APL_0331	hlp								√
APL_0364	ssa1 /aasP						√
APL_0379	glpA		√
APL_0381	glpC		√
APL_0382	ribD			√		√		√
APL_0383	ribE				√	√
APL_0384	ribA				√
APL_0391	macA						√		√
APL_0394	rpoE						√		√
APL_0395	rseA						√
APL_0443							√
APL_0449						√		√
APL_0626	macB						√		√
APL_0627	cpxA	√
APL_0629	cpxR								√
APL_0840	tolC						√		√
APL_0891	fdhD						√
APL_0892	fdxG				√	√
APL_0893	fdxG				√	√
APL_0894	fdxH		√		√	√
APL_0895	fdnI		√		√	√
APL_0896	fdhE		√		√
APL_0936								√
APL_0959							√
APL_1045							√		√
APL_1110								√
APL_1159							√		√
APL_1387				√		√		√
APL_1494	ftpA								√
APL_1550	wecD					√
APL_1552	wecB					√
APL_1553						√
APL_1554	wecA			√		√
APL_1674	dmsA				√	√
APL_1675	dmsB				√	√
APL_1676	dmsC				√	√
APL_1875							√		√
APL_1921	pgaA						√
APL_1922	pgaB						√
APL_1923	pgaC						√
APL_1924	pgaD						√
APL_1957							√		√
APL_1965	crp						√
APL_2012								√
APL_2029								√