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. 2013 May 16;14:333. doi: 10.1186/1471-2164-14-333

Table 2.

Percentage of CDSs from chromosome of Eklund 17B (NRP) scored positive by microarray analysis of strains of Group II C. botulinum

Strain Toxin subtype Clade Total number of CDSs present % of control CDSs present
Eklund 17B (NRP)
B4
1
3384
100
Eklund 2B
B4
1
3384
100
IFR 05/020
B4
1
3383
100
Colworth BL151
B4
1
3383
100
IFR 05/029
B4
2
2959
87
IFR 06/001
F6
2
2917
86
IFR 05/025
B4
2
2900
86
Eklund 202F
F6
2
2863
85
2129B
B4
2
2848
84
CDC 5900
B4
2
2846
84
ATCC 17844
B4
2
2845
84
Hobbs FT50
B4
2
2829
84
Kapchunka B2
B4
2
2806
83
CDC 4627 U-1
B4
2
2792
83
Kapchunka B5
B4
2
2777
82
Hobbs FT10
F6
2
2761
82
Craig 610
F6
2
2758
82
IFR 06/005
F6
2
2750
81
CDC 3875
B4
2
2716
80
CB-K-37E
E1
3
2428
72
CB-K-32E
E6
3
2424
72
CB-K-36E
E6
3
2404
71
CB-K-24E
E1
3
2403
71
IFR 02/050
E3
3
2403
71
CDC 8073
E2
3
2401
71
CB-K-23E
E1
3
2351
69
Foster B96
E3
3
2292
68
CB-K-16E
E1
3
2281
67
CB-S-3E
E1
3
2276
67
CB-K-40E
E3
3
2263
67
CB-S-27E
NTE
3
2249
66
CB-K-18E
E1
3
2242
66
Prevot P34
E3
3
2164
64
CB-K-34E
E1
3
2120
63
CB-S-20E
NTE
3
2095
62
CB-S-15E
NTE
3
2072
61
Dolman VH
E3
3
2064
61
Hazen 36208
E1
3
2058
61
CB-K-9E
E6
3
2024
60
CB-K-3E
E3
3
2023
60
CDC 7854
E1
3
2012
59
Beluga
E1
3
1990
59
CB-K-19E E1 3 1946 58

Sixty-mer probes were used to represent 3384 chromosomal sequences of Eklund 17B (NRP) on a microarray. Data show the number of these CDSs found in each test strain by microarray analysis. CDSs were considered to be present if the test probe signal was within 8-fold of the control probe signal and significantly above the background. NTE= no toxin gene detected but strain originally isolated containing type E neurotoxin gene.