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. 2013 Jul 6;10(84):20130151. doi: 10.1098/rsif.2013.0151

Figure 4.

Figure 4.

(a) Mean first-passage time for activation τon as a function of the volume V of the square-shaped reactor with periodic boundary conditions, obtained in on-lattice KMC simulations for three values of motility and (c1 = 0.02, c2 = 0.15), and other parameters with default values. For small V, τon grows exponentially with V (well-mixed regime), while for large V, τon decreases as 1/V. Every τon is a maximum-likelihood estimate from a time series with fixed censoring time, calculated based on thousands of trajectories and at least non = 10 observed switches. (b) Dependence of τon on the motility M for reactors of two different geometries, for the same parameters as in (a). For the square-shaped reactor, the expected τon grows exponentially with increasing motility M; for the long rectangular reactor with periodic boundary conditions, τon grows faster than Inline graphic but slower than Inline graphic.