Table 1.
Mendel analysis options
| Option number | Analysis name | Option number | Analysis name |
|---|---|---|---|
| 1 | Mapping markers | 16 | Combining alleles |
| 2 | Linkage analysis | 17 | Gene dropping |
| 3 | Pedigree haplotyping | 18 | Combining loci |
| 4 | Non-parametric linkage (NPL) | 19 | Variance components |
| 5 | Mistyping | 20 | QTL association |
| 6 | Allele frequencies | 21 | Trim pedigrees |
| 7 | Risk calculation | 22 | Association given linkage |
| 8 | Gamete competition | 23 | SNP imputation (haplotyping) |
| 9 | Pedigree selection | 24 | GWAS |
| 10 | Kinship | 25 | File conversion |
| 11 | Genetic equilibrium (HWE/LE) | 26 | MFG incompatibility |
| 12 | Association by permutation | 27 | Inbred strains |
| 13 | TDT | 28 | Simulate traits |
| 14 | Penetrance estimation | 29 | Pedigree GWAS |
| 15 | Ethnic admixture |