Table 2.
Primers used to characterize the sdY sequence in several salmonid species | |||
Species | Primer Pair | ||
Oncorhynchus masou | sdY E1Sb | sdY E4AS1a | |
Salmotrutta | sdY E1Sb | sdY E4AS1a | |
Salmosalar | sdY E1Sb | sdY E4AS1a | |
Parahuchoperryi | sdY E1Sb | sdY E4AS1a | |
Salvelinus alpinus | sdY E1Sb | sdY E4AS1a | |
Salvelinus fontinalis | sdY E1Sb | sdY E4AS1a | |
Coregonus lavaretus | sdY E1Sb | sdY E4AS1a | |
Huchohucho | sdY E1Sa | sdY E4AS1a | |
Parahuchoperryi | sdY E1Sa | sdY E4AS1a | |
Thymallusthymallus | sdY E1Sb | sdY E4AS1a | |
Stenodus leucichthys (E1) | OmyY1Fw11022 | OmyY1Rv11199 | |
Stenodus leucichthys (E2) | OmyY1Fw11178 | OmyY1Rv11918 | |
Stenodus leucichthys (E3) | OmyY1Fw13771 | OmyY1Rv13914 | |
Stenodus leucichthys (E4) | OmyY1Fw15916 | sdY E4AS1a | |
Primers for genotyping sdY in several species | |||
Species | Primer Pair | ||
Coregonus lavaretus | sdY E1S1 | sdY E2AS4 | |
Coregonus clupeaformis | sdY E1S1 | sdY E2AS4 | |
Stenodus leucichthys | sdY E2S1 | sdY E2AS4 | |
Thymallus thymallus | sdY E1S1 | sdY E2AS4 | |
Oncorhynchus mykiss | sdY E2S1 | sdY E2AS2 | |
Oncorhynchus masou | sdY E1S1 | sdY E2AS5 | |
Oncorhynchus tshawytscha | sdY E2S1 | sdY E2AS4 | |
Salvelinus malma malma | sdY E2S1 | sdY E2AS4 | |
Salvelinusalpinus | sdY E2S1 | sdY E2AS4 | |
Salvelinus fontinalis | sdY E2S1 | sdY E2AS2 | |
Salvelinus namaycush | sdY E2S1 | sdY E2AS1 | |
Salmo trutta | sdYE1S1 | sdY E2AS4 | |
Salmo salar | SS sdY S | SS sdY AS | |
Hucho hucho | HH sdY S | HH sdY AS | |
Parahuchoperryi | sdY E1S1 | sdY E2AS4 | |
all salmonid samples | 18S S | 18S AS | |
Primers tested for amplification of sdY in Northern pike (Esox lucius) | |||
Species | Primer Pair | ||
Esox lucius | sdY E2S2 | sdY E2AS2 | |
Esox lucius | sdY E2S1 | sdY E2AS1 | |
Esox lucius | sdY E2S1 | sdY E2AS3 |