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. 2013 May 23;14:344. doi: 10.1186/1471-2164-14-344

Table 2.

Summary of predicted glycosyl hydrolase 35 protein homologues

BGAL sub-family LuBGAL AA MWa (kDA) pIa Signal peptideb (Cleavage Site) Pfam domainc
 Possible destinations (WolfPSORT)d Possible destination (Plant-mPLOC)e
GH35 Lectin Copper oxidase
D
 41
 761
 84.697
 9.07
  No
 Y
 N
 N
 cl, v, n, cy, m, pm
 pm, cy
42
 701
 78.278
 8.06
  No
 Y
 N
 N
 cl, n, er, cy
 cw, cy
C1
 32
 816
 91.547
 9.03
  No
 Y
 Y
 N
 cy, px, m, , n
 cw
31
 756
 84.239
 9.07
  No
 Y
 Y
 N
 cy, n, px, v
 cw
29
 843
 94.393
 8.38
  Yes (34-35)
 Y
 Y
 N
 cl, ex, v, n
 cw
30
 833
 93.226
 7.42
  Yes (24-25)
 Y
 Y
 N
 cl, ex, v, n
 cw
28
 828
 93.86
 8.92
  Yes (24-25)
 Y
 Y
 N
 v, cl, er, g, m, p
 cw
27
 788
 89.565
 9.69
  Yes (22-23)
 Y
 N
 N
 v, ex, er, g, cl
 cw
26
 752
 85.192
 9.7
  Yes (25-26)
 Y
 N
 N
 v, g, cl, ex, er
 cw
C2
 40
 821
 92.792
 8.68
  Yes (19-20)
 Y
 Y
 N
 er, pm, n, m, ex
 cw
38
 810
 91.236
 9.06
  Yes (24-25)
 Y
 N
 N
 er, v, g, cl, n, cy, pm
 cw
39
 871
 98.135
 8.94
  Yes (23-24)
 Y
 Y
 N
 v, er, g, cl, n, cy, pm
 cw
33
 829
 91.265
 5.96
  Yes (30-31)
 Y
 Y
 N
 n, er, pm, cl, cy
 cw
37
 718
 80.437
 5.58
  Yes (22-23)
 Y
 N
 N
 v, ex, er, g, cl
 cw
34
 961
 108.198
 5.48
  Yes (23-24)
 Y
 N
 N
 v, g, er
 cw
35
 647
 71.944
 8.88
  No
 Y
 N
 N
 n, cl, cy
 cw
36
 706
 79.027
 8.79
  No
 Y
 N
 N
 v, er, g, cl, n
 cw
A1
 9
 727
 81.545
 8.69
  Yes (26-27)
 Y
 N
 N
 cl, ex, n, v, er, g
 cw
8
 683
 76.432
 8.72
  Yes (25-26)
 Y
 N
 N
 cl, ex, er, pm, m, cy, v
 cw
13
 849
 94.313
 6.62
  Yes (29-30)
 Y
 Y
 N
 v, cy, pm, cl, n, ex
 cw
14
 229
 25.653
 8.58
  No
 Y
 N
 N
 cl, n, cy
 pm, cl
12
 650
 72.077
 7.12
  Yes (28-29)
 Y
 Y
 N
 v, er, ex, g, cl, cy
 cw, pm
16
 849
 94.704
 7.37
  Yes (30-31)
 Y
 Y
 N
 er, pm, cy, cl, n, m, p
 cw
15
 802
 89.416
 6.65
  Yes (30-31)
 Y
 Y
 N
 er, pm, n, cl, cy, m, px
 cw
5
 844
 93.587
 6.79
  Yes (29-30)
 Y
 Y
 N
 cl, ex
 cw
6
 869
 95.928
 9.2
  No
 Y
 Y
 N
 cl, v, g, n, pm
 cw
7
 851
 94.066
 9.13
  Yes (24-25)
 Y
 Y
 N
 cl, ex
 cw
4
 717
 80.14
 9.16
  Yes (23-24)
 Y
 N
 N
 cl, n
 cw
3
 723
 80.594
 8.95
  Yes (23-24)
 Y
 N
 N
 cl, ex
 cw
1
 731
 80.978
 6.74
  Yes (29-30)
 Y
 N
 N
 cl, ex
 cw
2
 740
 81.923
 6.59
  Yes (29-30)
 Y
 N
 N
 cl, ex
 cw
A4
 11
 897
 100.599
 6.38
  Yes (24-25)
 Y
 N
 N
 pm, g
 cw
10
 854
 94.48
 5.31
  Yes (24-25)
 Y
 Y
 N
 v, pm, er, g, cl
 cw
18
 297
 32.849
 7.62
  No
 Y
 N
 N
 m, cy, n, cl, pm, v, er
 cl
17
 836
 91.017
 8.14
  No
 Y
 Y
 N
 cy, v, n, m, pm, cl
 cw
B
 43
 107
 11.805
 7.57
  Yes (31-32)
 Y
 N
 N
 ex, v, cl, cy, m, er
 pm
A5
 22
 1460
 162.474
 5.41
  Yes (19-20)
 Y
 Y
 N
 ex, v, cl, n, pm
 cw
24
 1330
 147.844
 8.24
  Yes (23-24)
 Y
 Y
 Y (3)
 v, cl, n, pm, m, ex
 pm, cw
21
 871
 96.999
 8.57
  Yes (26-27)
 Y
 Y
 N
 er, n, pm, g, cy
 cw
20
 874
 97.552
 8.75
  Yes (26-27)
 Y
 Y
 N
 ex, v, er, g, cl, n, cy
 cw
23
 718
 80.588
 5.3
  Yes (19-20)
 Y
 N
 N
 ex, cl, v, cy
 cw
25
 261
 29.969
 8.26
  No
 Y
 N
 N
 n, cy, cl
 cl
A2 19 880 98.216 6.52  Yes (27-28) Y Y N cl, v, g, pm cw

aPredictions made with CLC Genomics Workbench 5.5.

bSignalP 4.0 prediction [45].

cPfam domains and locations were identified with CLC Genomics Workbench 5.5.

dWolfPSORT prediction [46], in order of decreasing likelihood.

ePlant-mPLOC prediction [47].

Protein Destinations: cl (chloroplast), cy (cytosol), cs (cytoskeleton) cw (cell wall), er (endoplasmic reticulum), ex (extracellular), g (golgi apparatus), l (lysosome), m (mitochondria), n (nuclear), px (peroxisome), pm (plasma membrane), v (vacuolar membrane).