Table 5.
Plasmids used in this study
| Plasmid | Description | Reference |
|---|---|---|
| pRS414 |
pBluescript II SK+, TRP1, CEN6, ARSH4 |
[39] |
| pRS416 |
pBluescript II SK+, URA3, CEN6, ARSH4 |
[39] |
| pRS426 |
pBluescript II SK+, URA3, 2μ origin |
[39] |
| pJ201 |
Gene synthesis vector |
(DNA2.0) |
| pRH164 |
pRS414 + PHXT7-MCS-THXT7 |
[27] |
| pRH167 |
pRS426 + PHXT7-MCS-THXT7 |
[27] |
| pRH195 |
pRS414 + PHXT7-S. cerevisiae XKS1-THXT7 |
[27] |
| pRH218 |
pRS426 + PHXT7-Piromyces sp. E2 XI-THXT7 |
[40] |
| pRH325 |
pCR2.1 TOPO + Bacteroides uniformis XI |
This work |
| pRH326 |
pCR2.1 TOPO + Bacteroides distasonis XI |
This work |
| pRH327 |
pCR2.1 TOPO + Bacteroides ovatus XI |
This work |
| pRH351 |
pRS426 + PHXT7-Bacteroides uniformis XI-THXT7 |
This work |
| pRH352 |
pRS426 + PHXT7-Bacteroides distasonis XI-THXT7 |
This work |
| pRH353 |
pRS426 + PHXT7-Bacteroides ovatus XI-THXT7 |
This work |
| pRH357 |
pCR2.1 TOPO + Prevotella ruminicola strain TC2-24 XI |
This work |
| pRH360 |
pCR2.1 TOPO + Bacteroides uniformis xylB (D-xylulokinase) |
This work |
| pRH367 |
pRS426 + PHXT7-Prevotella ruminicola XI-THXT7 |
This work |
| pRH369 |
pRS426 + PHXT7-Bacteroides uniformis xylB-THXT7 |
This work |
| pRH379 |
pJ201 + Prevotella ruminicola TC2-24 codon-adapted XI |
This work |
| pRH380 |
pJ201 + Prevotella ruminicola 23 codon-adapted XK |
This work |
| pRH384 |
pRS426 + PHXT7-P. ruminicola TC2-24 codon-adapted XI -THXT7 |
This work |
| pRH385 |
pRS414 + PHXT7-P. ruminicola 23 codon-adapted XK -THXT7 |
This work |
| pRH544 |
pRS414 + PHXT7-P. ruminicola 23 codon-adapted XK -THXT7 rescued from YRH1114 |
This work |
| pRH545 | pRS426 + PHXT7-P ruminicola TC2-24 codon-adapted XI -THXT7 rescued from YRH1114 | This work |
For all plasmids listed using the HXT7 promoter, PHXT7 is the truncated version of the HXT7 promoter for constitutive expression.