Table 4.
Sequences of the primers used for constructing strains E.coli K4-pTrc rfaH , EcK4r1 and EcK4r3, and for real time PCR experiments
Primer | Sequence |
---|---|
rfaHpTrc1 |
5′-TAAAGGAGGTATACAAAAATGCAATCCTGGTATTTACTGTAC-3′ |
rfaHpTrc2 |
5′-TTAGAGTTTGCGGAACTCGGTAT-3′ |
16Sq_Up |
5′- GGTGTAGCGGTGAAATGCGTAGAG-3′ |
16Sq_Dw |
5′- CAAGGGCACAACCTCCAAGTC-3′ |
qkfoC_Up |
5′-TTTTCCCTGCCGCACGATCC-3′ |
qkfoC_Dw |
5′-TTCGGTCTGTTGAAGGAGCAATGG-3′ |
qkfoA_Up |
5′-GGATTTAGCGGAAGGGCATGTG-3′ |
qkfoA_Dw |
5′-TTCTGGTGATGACCAACTTTCAGC-3′ |
P1=pK4EC05_Up |
5′-CAGCACAGCAGAGCGAAGTGCATCATATCCTTCCAGATTTAAATTCTTCAAATTAACCCTCACTAAAGGGCG-3′ |
P2=pk4EC05_Dw |
5′-AAACTGTGATCGGGCGTAGGAACCCGCGTAGTCATCGTCGGCGCAGAAGTTTAGAGTTTGCGGAACTCGGTAT-3′ |
P3=LacZ_Up |
5′-CACCCTGGCGCCCAATACGCAAACCGCCTCTCCCCGCGCGTTGGCCGATTCATTAATGCAGCTGGCACGACAGGTTTCCCGACTGGAAAGCGGGCAGTGAAATTAACCCTCACTAAAGGGCGG-3′ |
P4=LacZ_Dw |
5′- AAAAGAATAAACCGAACATCCAAAAGTTTGTGTTTTTTAAATAGTACATAATGGATTTCCTTACGCGAAATACGGGCAGACATGGCCTGCCCGGTTATTTAGAGTTTGCGGAACTCGGTATTC-3′ |
P5=FRT_Dw |
5′-TAATACGACTCACTATAGGGCT-3′ |
P6=pGapA_Up |
5′-CCCTCGAGGGCCTTTAAAATTCGGGGCGCCGA-3′ |
P7=pGapA_Dw |
5′-CGGGATCCCGATATTCCACCAGCTATTTGTTAG-3′ |
P8=rfaH_Up | 5′-CGGGATCCCGATGCAATCCTGGATTTTACTGTAC-3′ |