Table 2.
Summary statistics for the discovery GWAS case control datasets
| Category | Disorder | Data Source | Sample Size |
SNP # | |
|---|---|---|---|---|---|
| Case | Control | ||||
| Psychiatric illness | Major depressive disorder | PGC | 9240 | 9519 | 1,235,033 |
| ADHD | PGC | 2887 | 2635 | 1,234,271 | |
| Bipolar disorder | PGC | 6990 | 4820 | 1,237,862 | |
| Schizophrenia | PGC | 9379 | 7736 | 1,241,747 | |
| Nonpsychiatric illness | Coronary artery disease | WTCCC | 1926 | 2935 | 404,508 |
| Crohn's disease | WTCCC | 1748 | 2935 | 404,699 | |
| Hypertension | WTCCC | 1952 | 2935 | 404,339 | |
| Rheumatoid arthritis | WTCCC | 1860 | 2935 | 404,469 | |
| Type 1 diabetes | WTCCC | 1963 | 2935 | 404,477 | |
| Type 2 diabetes | Diagram | 8130 | 38,987 | 2,255,856 | |
PGC (https://pgc.unc.edu/index.php); WTCCC, Wellcome Trust Case Control Consortium (http://www.wtccc.org.uk/); Diagram, Diabetes Genetics Replication And Meta-Analysis Consortium (http://www.well.ox.ac.uk/DIAGRAM/index.html).