Table 3.
Average Performance (Correct Adjacencies)
| | |||
|---|---|---|---|
| Programs | Closest | Top 10 | Top 20 |
|
sis (promer) |
60.96 |
50.01 |
37.27 |
| r2cat |
59.72 |
44.19 |
30.30 |
| Mauve |
58.65 |
46.31 |
32.17 |
|
sis (nucmer) |
56.39 |
43.95 |
28.55 |
| fillScaffolds (nucmer) |
48.47 |
34.10 |
21.32 |
| OSLay |
46.83 |
34.03 |
21.28 |
| fillScaffolds (promer) |
44.19 |
32.94 |
21.63 |
| CONTIGuator |
42.02 |
30.35 |
20.01 |
| Projector 2 |
36.89 |
25.35 |
15.51 |
| ABACAS | 33.80 | 23.95 | 13.20 |