Table 4.
Best Scaffolds (Correct Adjacencies)
| | |||
|---|---|---|---|
| Programs | Closest | Top 10 | Top 20 |
|
sis (promer) |
56.52 |
59.13 |
64.57 |
|
sis (nucmer) |
39.13 |
27.83 |
20.87 |
| Mauve |
26.09 |
25.65 |
23.26 |
| OSLay |
21.74 |
15.65 |
11.30 |
| fillScaffolds (nucmer) |
21.74 |
11.30 |
8.70 |
| ABACAS |
17.39 |
11.74 |
7.61 |
| r2cat |
13.04 |
16.09 |
15.65 |
| CONTIGuator |
13.04 |
9.57 |
6.30 |
| Projector 2 |
8.70 |
6.09 |
4.57 |
| fillScaffolds (promer) | 0.00 | 6.96 | 8.04 |