Table 3.
Level of recombination using the pairwise homoplasy test (PHI) implemented in Splits Tree software
| Gene(s) | Statistically significant evidence for recombination | P value |
|---|---|---|
| All | Yes | 0 |
| Chromosome 1 | Yes | 0 |
| Chromosome 2 | Yes | 2.62E−12 |
| dtdS (chromosome 2) | No | 0.7863 |
| glp (chromosome 1) | Yes | 2.13E−5 |
| Cluster I | No | 0.05173 |
| Cluster II | Yes | 2.82E−7 |
| gyrB (chromosome 1) | No | 0.5056 |
| lysA (chromosome 2) | No | 1.439E−6 |
| mdh (chromosome 1) | No | 0.2934 |
| metG (chromosome 1) | Yes | 2.83E−4 |
| Cluster I | No | 0.01959 |
| Cluster II | Yes | 0.01595 |
| pntA (chromosome 2) | No | 0.9509 |
| pyrC (chromosome 2) | Yes | 0.02787 |
| Cluster I | No | 1 |
| Cluster II | Yes | 0.08041 |
| tnaA (chromosome 2) | No | 0.9051 |
| purM (chromosome 1) | No | 0.7035 |