Table 3.
Selected catabolic enzymes identified in the sphingomonad genomesa
| Organism | No. of enzymes |
|||||||
|---|---|---|---|---|---|---|---|---|
| Monooxygenases |
Dioxygenases |
Cellulase families |
||||||
| NMO (K00459) | VanA (K03862) | SsuD (K04091) | TauD (K03119) | HppD (K00457) | GH5 | GH6 | GH9 | |
| Novosphingobium | ||||||||
| Novosphingobium aromaticivorans DSM 12444 | 4 | 4 | 1 | 2 | 2 | |||
| Novosphingobium nitrogenifigens Y88T | 3 | 1 | 2 | 3 | 1 | |||
| Novosphingobium pentaromativorans US6-1 | 6 | 5 | 2 | 2 | 2 | |||
| Novosphingobium sp. strain AP12 | 5 | 16 | 17 | 1 | ||||
| Novosphingobium sp. strain PP1Y | 3 | 2 | 1 | 1 | 2 | 1 | 1 | |
| Novosphingobium sp. strain Rr 2-17 | 3 | 2 | 5 | 1 | ||||
| Sphingopyxis | ||||||||
| Sphingopyxis alaskensis RB2256 | 6 | 1 | 1 | 1 | ||||
| Sphingobium | ||||||||
| Sphingobium chlorophenolicum L-1 | 7 | 1 | 1 | 6 | 1 | |||
| Sphingobium indicum B90A | 5 | 1 | 1 | |||||
| Sphingobium japonicum UT26S | 7 | 2 | 1 | 1 | ||||
| Sphingobium sp. strain AP49 | 4 | 1 | 2 | 4 | 1 | |||
| Sphingobium sp. strain SYK-6 | 2 | 7 | 7 | 1 | ||||
| Sphingobium yanoikuyae XLDN2-5 | 4 | 2 | 4 | 2 | 2 | |||
| Sphingomonas | ||||||||
| Sphingomonas echinoides ATCC 14820 | 2 | 1 | 1 | |||||
| Sphingomonas elodea ATCC 31461 | 2 | 1 | 2 | 1 | 1 | 1 | 1 | |
| Sphingomonas sp. strain KC8 | 4 | 1 | 2 | 1 | ||||
| Sphingomonas sp. strain Mn802 | 2 | 1 | 1 | |||||
| Sphingomonas sp. strain PR090111-T3T-6A | 3 | 1 | 1 | |||||
| Sphingomonas sp. strain S17 | 3 | 2 | 1 | 2 | ||||
| Sphingomonas sp. strain SKA58 | 3 | 1 | 1 | 1 | ||||
| Sphingomonas sp. strain ATCC 31555 | 2 | 1 | 1 | 2 | 2 | |||
| Sphingomonas sp. strain PAMC 26605 | 3 | 3 | 1 | 1 | 1 | |||
| Sphingomonas sp. strain PAMC 26617 | 2 | 2 | 1 | 2 | 4 | 2 | ||
| Sphingomonas sp. strain PAMC 26621 | 2 | 2 | 1 | 2 | 2 | |||
| Sphingomonas wittichii DP58 | 4 | 19 | 5 | 8 | 1 | |||
| Sphingomonas wittichii RW1 | 5 | 24 | 4 | 7 | 1 | |||
a
NMO, nitranoate monooxygenase; VanA, vanillate monooxygenase; SsuD, alkanesulfonate monooxygenase; TauD, taurine dioxygenase; HppD, 4-hydroxyphenylpyruvate dioxygenase.