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. 2013 Jun;195(11):2612–2620. doi: 10.1128/JB.00230-13

Fig 1.

Fig 1

Conservation of competence regulons in the S. bovis group. The presence of full-length gene orthologs of sigX (comX), of its target late competence genes, and of the comRS pheromone circuit genes was determined by analysis of complete or draft genomes, for which species and strains are indicated at the left. Genes are not drawn to scale. Black bar, cinbox promoter; gray bar, ComR box promoter; empty pentagon, missing or incomplete gene sequence; *, truncated gene; ▽, presence of other genes. The radA cinbox is located in front of the upstream gene, dut. Colors indicate percent sequence match of protein products to the translation products of genes in S. infantarius ATCC BAA-102: comR (STRINF_00393), comS (not annotated), comX (STRINF_00080), comGA (STRINF_00857), comGB (STRINF_00856), comGC (STRINF_00855), comGD (STRINF_00854), comGE (STRINF_00853), comGF (STRINF_00852), comGG (STRINF_00851), ssbB (STRINF_00838), comFA (STRINF_00254), comFC (STRINF_00255), comC (STRINF_00665), cbpD (lytF) (STRINF_01688), comEA (STRINF_00591), comEC (STRINF_00590), coiA (STRINF_01410), dprA (STRINF_01270), radA (STRINF_00885), radC (STRINF_01176), cinA (STRINF_00511), and recA (STRINF_00510). Sources of sequences analyzed: S. infantarius (Sinf) ATCC BAA-102 (PRJNA54885), CJ18 (PRJNA87033), 3AG-1 (PRJEB257), and 11FA-1 (PRJEB239); S. lutetiensis (Slut) metagenomic assembly (MGS) (PRJNA189563); S. macedonicus (Smac) ACA-DC-198 (PRJNA81631) and 679 (PRJEB268); S. gallolyticus (Sgal) ATCC 43143 (PRJDA162103), ATCC BAA-2069 (PRJNA63617), and UCN34 (PRJNA46061); S. equinus (Sequ) ATCC 9812 (PRJNA62297); S. pasteurianus (Spas) ATCC 43144 (PRJDA62519) and ATCC 700338 (designated in GenBank as S. bovis but assigned here as an S. pasteurianus strain based on its sodA gene sequence) (PRJNA52359); S. thermophilus (Sthe) LMD9 (PRJNA58327); and S. pneumoniae (Spne) TIGR4 (PRJNA57857).