Table 2.
RT-qPCR primers sequences for validated targets
Gene name | Ref_Seq mRNA | Forward primer (5′–3′) | Reverse primer (3′–5′) |
---|---|---|---|
HOXB8 | NM_024016 | GTC CGT GCG CGC CAA TTA TTA | GCC CGT GGT AGA ACT CGT G |
HOXB7 | NM_004502 | CCA GCC TCA AGT TCG GTT TTC | CGC GAA CGC GCT CCA TAG |
HOXB5 | NM_002147 | AAC TCC TTC TCG GGG CGT TAT | CAT CGCATT GTA ATT GTA GCC GT |
ZIC2 | NM_007129 | CAC AAC CAG TAC GGC CGCATG AA | AGC TCC TGC TTG ATG CAC TGC TG |
CXCL1 | NM_001511 | AGG GAA TTC ACC CCA AGA AC | ACT ATG GGG GA T GCA GGA TT |
HOXB2 | NM_002145 | CGT TCC CGA CGT CAA cn CTT | CTC TTC CTC GGA AM AGG GAC |
GDF15 | NM_004864 | CGC GGGACC CTC AGA GTT | CCG CAG CGT GGT TAG CA |
DDIT4 | NM_019058 | AGG AAG CTC ATT GAG TTG TG | GGT ACA TGC TAC ACA CAC AT |
SLC7A5 | NM_003486 | AGA AGG AAG AGG CGC GGG AGA AGA T | AAG ATG CGCGAG CCG ATA ATG GTC |
TRIB3 | NM_021158 | GCC CTG CAC TGC CGTACA G | GGT ACC AGC CAG GAC CTC AGT |
CBS | NM_000071 | ACA TGC TCT CGT CGC TGC TT | GTG AGG CGG ATC TGT TTG AAC T |
PDGFRL | NM_006207 | TTG GGT GGA GCT ACC CTG CGT ATC | ACT GGC CGT AGC GCT CAT TCT G |
TBX15 | NM_152380 | ATT CTG GAG ACC TCC TGT GCG C | CCA CAT TGA AAG TGT TGG GGG CC |
HCLS1 | NM_005335 | GAC GGA GAA ACA CGA GTC CCA GAG | TGG TCG GGG CGT CCA TTT CAT TG |
PITX1 | NM_002653 | MG TGG CGTAAG CGC GAG CGT AA | GAC AGC GGG CTC ATG GAG TTG AAG |
COMP | NM_000095 | TAT CGT TGG TTC CTG CAG CAC CG | GCA TGG TTG TGT CCA AGA CCA CGT |
BEX1 | NM_018476 | CAC TCG TGT CTC GCT ACC AG | CTG CTC GTT TCT CTT TGG ACT C |
PCDH10 | NM_020815 | CAC AAA GTC GAC CAA CAA AA | ATG ATG ACT CCA TCC GAA AT |
TGM2 | NM_004613 | GCC ACT TCA TTT TGC TCT TCA A | TCC TCT TCC GAG TCC AGG TAC A |
MAB21L2 | NM_011839 | CAG CCG CTC AAC AAC TAC CA | CTC GTC CCA GTC CGT TTC TC |
BST2 | NM_004335 | GAT GCA GAG AAG GCC CAA GGA CAA A | ACT TCT TGT CCG CGA TTC TCA CGC |
ERAP2 | NM_001130140 | TGG ATG GGA CCA ACT CAT TAC A | TGC ACC AAC TAG CT AAA CAC |
HOXA13 | NM_000522 | AGC GCG TGC CTT ATA CCA AG | GCC GCT CAG AGA GAT TCG T |
HOXA10 | NM_018951 | AGC CTC GCC GGA GAA GGA TT | CCA GTG TCT GGT GCT TCG TGT AG |