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. Author manuscript; available in PMC: 2014 Jul 1.
Published in final edited form as: Genomics. 2013 Apr 6;102(1):1–7. doi: 10.1016/j.ygeno.2013.03.009

Figure 1.

Figure 1

The topology of our THMM. Each bin-level state is represented by a circled color-coded according to its corresponding domain-level state (represented by a box). Note that transitions between different domain-level states can only occur via a special bin-level state from each domain. States within the null domain are represented by the color yellow; states within the active domain are shown in red; states within the non-active domain are in blue.