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. 2013 May 21;14(5):10552–10569. doi: 10.3390/ijms140510552

Table 1.

The correlation coefficient of the B-factor between the experiment and Gaussian Network Model (GNM) of RBP and five other proteins belonging to the Escherichia coli family.

Periplasmic binding proteins Pdb ID Correlation Reference Resolution (Å)
Leucine-binding protein Apo 1USG 0.554 Magnusson 2004 [35] 1.53
Complex 1USI 0.64 1.8

Nickel-binding protein Apo 1UIU 0.492 Heddle 2003 [36] 1.85
Complex 1UIV 0.531 1.95

Allose-binding protein Apo 1GUD 0.69 Chaudhuri 1999 [37] 1.71
Complex 1RPJ 0.594 Magnusson 2002 [8] 1.8

Glutamine-binding protein Apo 1GGG 0.488 Hsiao 1996 [38] 2.3
Complex 1ANF 0.581 Sun 1998 [39] 1.94

Maltose-binding protein Apo 1OMP 0.653 Sharff 1992 [40] 1.8
Complex 1ANF 0.594 Quiocho 1997 [41] 1.67

Ribose-binding protein Apo 1URP 0.583 Bjorkman 1998 [9] 2.3
Apo 1BA2 0.669 Bjorkman 1998 [9] 2.1
Complex 2DRI 0.772 Bjorkman 1994 [11] 1.6