Table 4.
Candidate microRNAs predicted by GSEA
Gene Sets | Module Affected | ES1 | NES2 | NOM3 p-value | FDR q- value | microRNA specific primer (5′-3′) |
---|---|---|---|---|---|---|
MIR-520A-5p | Module 3 | 0.646 | 1.404 | 0.000 | 0.038 | CTCCAGAGGGAAGTACTTTCT |
MIR-194 | Module 3 | 0.655 | 1.407 | 0.000 | 0.039 | TGTAACAGCAACTCCATGTGG |
MIR-412 | Module 3 | 0.676 | 1.401 | 0.006 | 0.039 | ACTTCACCTGGTCCACTAGC |
MIR-503 | Module 5 | 0.727 | 1.414 | 0.016 | 0.158 | TAGCAGCGGGAACAGTTCTG |
MIR-483 | Module 5 | 0.669 | 1.378 | 0.000 | 0.150 | TCACTCCTCTCCTCCCGTCT |
MIR-149 | Module 5 | 0.648 | 1.371 | 0.000 | 0.114 | TCTGGCTCCGTGTCTTCACT |
ES: Enrichment score
NES: Normalized enrichment score
NOM: Nominal p-value