Table 5. Genetic polymorphism of HAH5 genes in the globular head region.
Amino acid residue in HA ofb | ||||||
Amino acid positiona (antigenic site) | A/chicken/Yamaguchi/7/2004 (H5N1) clade 2.5 | A/whooper swan/Mongolia/3/2005 (H5N1) clade 2.2 | A/Vietnam/1194/2004 (H5N1) clade 1 | A/duck/Hokkaido/Vac-01/2004 (H5N1) classical clade | A/duck/Potsdam/1402-6/1986 (H5N2) classical clade | A/teal/Foehr/Wv1378-79/2003 (H5N2) classical clade |
45 (C) | D | D | D | S | S | S |
71 (E) | I | L | I | L | L | L |
83 (E) | A | I | A | D | D | D |
86 (E) | S | A | V | I | I | V |
94 | N | N | D | D | D | D |
124 (B) | D | D | S | D | D | N |
129 | S | S | L | S | S | S |
138 (A) | Q | Q | Q | N | N | N |
140 (A) | R | R | K | R | R | R |
155 (B) | S | N | S | N | N | S |
156 | A | A | T | A | A | A |
174 | V | V | V | V | I | V |
181 | P | P | P | P | P | P |
183 | D | D | D | D | D | D |
189 (B) | R | R | K | K | K | K |
212 (D) | K | K | R | E | E | E |
227 | E | E | E | E | E | E |
263 (E) | A | T | T | T | T | T |
269 | L | L | L | L | L | L |
277 | K | K | K | K | K | K |
282 (C) | M | I | M | M | M | M |
Numbering according to the mature H5 hemagglutinin.