Table 1. Data collection and refinement statistics.
Data Collection and Refinement | IKK2(11–669)EE |
Data collection | |
X-ray source | APS 19ID |
Wavelength (Å) | 0.97935 |
Space group | P4122 |
Unit cell (Å) | |
a | 170.81 |
b | 170.81 |
c | 509.56 |
Molecules/asymm. unit | 6 |
Resolution range (Å)a | 30.0–3.98 (4.12–3.98) |
R sym (%) | 13.9 (73.6) |
Observations | 248,094 |
Unique reflections | 63,535 |
Completeness (%) | 96.2 (97.9) |
<I/σ> | 6.3 (2.4) |
Refinement | |
Number of reflectionsb | 53,076 |
R cryst (%) | 26.7 (37.6) |
R free (%)c | 29.9 (39.3) |
Protein atoms | 30,060 |
R.m.s.d. | |
Bond lengths (Å) | 0.0093 |
Bond angles (°) | 1.08 |
Ramachandran plot | |
Favored | 65% |
Allowed | 33% |
Disallowed | 2% |
MolProbity scored | 3.40 |
PDB accession code | 4E3C |
Data in parentheses are for highest resolution shell.
Reflections with |F O|/σ<1.0 rejected.
Calculated against a cross-validation set of 3.8% of data selected at random prior to refinement.
Combines clashscore, rotamer, and Ramachandran evaluations in to a single score, normalized to the same scale as x-ray resolution [40].