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. 2013 Jun 11;8(6):e66087. doi: 10.1371/journal.pone.0066087

Table 1. Bioinformatics-based prediction of NF-κB sites in eIFH promoters.

Gene Name PutativeNF-κB site(s) byJASPAR PutativeNF-κB site(s) byTFSEARCH Position on promoter NF-κB consensussequence
Core Initiation Factors EIF1 0 0
EIF1A 0 0
EIF2S1(eIF2-alpha) 0 0
EIF2S2(eIF2-beta) 1 0 −684;−675 CGGTGTTTCC
eIF2S3(eIF2-gamma) 1 1 −107; −98 TGGAGTTTCC
eIF2B1 0 0
eIF2B2 0 0
eIF2B3 1 1 −730; −721 GGGACTTCCT
eIF2B4 0 0
EIF3A 0 0
EIF3B 0 0
EIF3E 1 0 −98; −89 GGGGTTTACC
EIF3F 0 0
EIF3G 0 0
EIF3H 0 0
EIF3I 0 0
EIF3J 0 0
EIF3K 0 0
EIFS8 0 0
EIF4A1 1 1 −418; −408 GAGGATTCCCC
EIF4A2 2 2 −362; −353−281; −272 GGGGCTTCCC;CGGGGTTTCC
EIF4A3 0 0
EIF4B 0 0
EIF4E 0 0
EIF4G1 0 0
EIF4G2 1 0 −671; −662 CGGACATTCC
EIF4G3 0 0
EIF4H 2 2 −253; −244−210; −201 GGGAGTTCCC;CGGCCTTTCC
EIF5 0 0
EIF5B 1 0 −238; −229 CGGGTTTTCC

Jaspar- and TFSEARCH-based computational analysis predicted putative NF-κB enhancers in the promoter regions of core eukaryotic translation initiation factors.