Figure 5.

Network analysis of correlated motions in the LOV domain. (a) Partition of residues from the dark (left) and light (right) states into communities; the communities are colored in numerical order: blue, red, gray, orange, yellow, tan, purple, green, white. (b) Community identity of each residue in the dark (left) and light states. (c) Interactions of communities in the dark (left) and light states; the width of each edge is proportional to the number of shortest paths passing through the interface of those communities (see Sethi et al. ⁵⁴). Membership of nodes from the chromophore is indicated by letters within the circle for each node, based on the division shown in an inset.