Table 1.
Library | Sequencing method | # Reads (raw) | # Reads (high quality) | Avg read length (high quality) |
---|---|---|---|---|
Mixed1 |
GS-FLX titanium, single end, random primed, normalised |
799,937 |
786,113 |
297 |
Mixed1 |
GS-FLX titanium, single end, 3’ primed, normalised |
568,762 |
558,729 |
312 |
Leaves1 |
HiSeq2000, single end, random primed, 100bp, normalised |
127,318,285 |
107,557,660 |
96 |
Stem & primoridia1 | HiSeq2000, single end, random primed, 50bp | 516,292,741 | 471,046,908 | 50 |
1 See Additional file 1: Table S1 for details.