Table 2.
Methods | Domain [total no. of sequences (%)] | Diversity (% in domain) |
---|---|---|
HMM | Bacteria (51, 72.9) | Deltaproteobacteria (25.4) |
Gammaproteobacteria (21.6) | ||
Epsilonproteobacteria (13.7) | ||
Deferribacteres (7.8) | ||
Archaea (19, 27.1) | Euryarchaeota (63.2) | |
Crenarchaeota/Thermoprotei (36.8) | ||
BLASTN | Bacteria (69, 76.7) | Deltaproteobacteria (23.4) |
Gammaproteobacteria (18.8) | ||
Epsilonproteobacteria (12.5) | ||
Acidobacteria (9.4) | ||
Deferribacteres (7.8) | ||
Archaea (21, 23.3) | Euryarchaeota (52.4) | |
Crenarchaeota/Thermoprotei (47.6) |