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. Author manuscript; available in PMC: 2013 Jun 14.
Published in final edited form as: Neuroinformatics. 2012 Jan;10(1):57–66. doi: 10.1007/s12021-011-9126-x

Table 1.

Basic concepts within CogPO

Concepts Parent class Definition Restrictions
Behavioral Experimental Paradigm OBI:’Planned process’, BFO: processual_entity Within an Experimental Paradigm, the behavioral paradigm describes the behavioral aspects of the experiment: what stimuli are presented to the subject when, and under what conditions, and what the subject’s responses are supposed to be. Must have_part at least one Behavioral Experimental Paradigm Condition
Behavioral Experimental Paradigm Condition OBI:’Planned process’, BFO: processual_entity A planned combination of stimuli and instructions regarding responses to the experimental subjects (who are only involved once the process is implemented). (has_instructions some Instructions) and (has_stimulus some Stimulus) and (has_response_type some Response)
Stimulus Role BFO:role The role of a stimulus in a behavioral experiment is attributed to the object(s) which are presented to the subject in a controlled manner in the context of the experiment.
Response Role BFO:role The role of response is attributed to the overt or covert behavior which is elicited from the subject in an experimental condition.
Stimulus BFO:ObjectAggregate The object or set of objects, internal or external to the subject, which is intended to generate either an overt or covert response in the subject as part of an experimental condition.
Response BFO:’process aggregate’ The overt or covert behavior which is elicited from the subject in an experimental condition.
Instructions IAO:’action specification’, BFO: generically_ independent_continuant Instructions are the information-bearing entity that sets up the rules for desired behavior from the subjects. An explicit direction that guides the behavior of the subject during the experimental conditions. Instruc- tions serve the function that they lay out what the response behaviors should be for any set of stimuli in the experiment.
Stimulus Modality BFO:quality The quality of the sensory perception of an explicit stimulus. Inheres_in only Explicit Stimulus
Response Modality BFO:FiatObjectPart Class of body parts used to perform the actions which can play the role of an overt response
Relationships Parent Class Domain Range
Has_stimulus Has_participant Behavioral Experimental Paradigm Condition Stimulus
Has_response_type Has_part Behavioral Experimental Paradigm Condition Response
Has_instructions Has_participant Behavioral Experimental Paradigm Condition Instructions
Has_stimulus_modality Bearer_of Explicit Stimulus Stimulus Modality
Has_response_modality Has_participant Overt Response Response Modality