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. Author manuscript; available in PMC: 2013 Jun 15.
Published in final edited form as: Chem Res Toxicol. 2012 Jul 31;25(8):1699–1707. doi: 10.1021/tx300168p

Table 2.

Steady-State Kinetic Parameters for dNTP Incorporation Opposite DNA Lesions by Vent (exo)

template base dNTP Km (µM) kcat (s−1) kcat/Km (mM−1 s−1) f ins a relative effciencyb
G A 2300 ± 400 0.0098 ± 0.0008 0.0043 0.00039 3.9 × 10−4
T 2700 ± 400 0.043 ± 0.004 0.016 0.0015 1.5 × 10−3
G 1200 ± 200 0.012 ± 0.0006 0.01 0.00091 9.1 × 10−4
C 6.2 ± 1.7 0.065 ± 0.003 11 1 1
N2-MeG A 3200 ± 400 0.0068 ± 0.0004 0.0021 0.1 1.9 × 10−4
T 1800 ± 300 0.0021 ± 0.0001 0.0012 0.057 1.1 × 10−4
G 84 ± 32 0.0052 ± 0.0005 0.062 3 5.6 × 10−3
C 1300 ± 200 0.027 ± 0.001 0.021 1 1.9 × 10−3
N2-BzG A 2500 ± 400 0.0053 ± 0.0005 0.0022 52 2.0 × 10−4
T 2300 ± 500 0.0004 ± 0.000004 0.00017 4 1.5 × 10−5
G 1600 ± 300 0.0006 ± 0.00005 0.0004 10 3.6 × 10−5
C 2400 ± 600 0.0001 ± 0.000002 0.000042 1 3.8 × 10−6
O6-MeG A 2800 ± 900 0.0029 ± 0.0005 0.0011 0.058 1.0 × 10−4
T 380 ± 60 0.014 ± 0.0007 0.037 1.9 3.3 × 10−3
G 2300 ± 200 0.0067 ± 0.0004 0.0029 0.15 2.6 × 10−4
C 1200 ± 200 0.022 ± 0.002 0.019 1 1.7 × 10−3
O6-BzG A 1500 ± 300 0.0017 ± 0.0001 0.0011 0.18 1.0 × 10−4
T 960 ± 30 0.003 ± 0.0003 0.0031 0.51 2.8 × 10−4
G 310 ± 150 0.0002 ± 0.00003 0.00064 0.1 5.8 × 10−5
C 130 ± 60 0.0008 ± 0.00008 0.0061 1 5.5 × 10−4
AP site A 430 ± 70 0.043 ± 0.002 0.099 40 9.0 × 10−3
T 2100 ± 900 0.017 ± 0.003 0.0081 3.2 7.4 × 10−4
G 2300 ± 700 0.043 ± 0.007 0.019 7.6 1.7 × 10−3
C 830 ± 250 0.0021 ± 0.0002 0.0025 1 2.3 × 10−4
a

Misinsertion frequency, calculated by dividing kcat/Km for dNTP incorporation by the kcat/Km for dCTP incorporation opposite each template base.

b

Relative insertion efficiency, calculated by dividing kcat/Km for dNTP incorporation opposite each template base by the kcat/Km for dCTP incorporation opposite template G.