Table 2.
template base | dNTP | Km (µM) | kcat (s−1) | kcat/Km (mM−1 s−1) | f ins a | relative effciencyb |
---|---|---|---|---|---|---|
G | A | 2300 ± 400 | 0.0098 ± 0.0008 | 0.0043 | 0.00039 | 3.9 × 10−4 |
T | 2700 ± 400 | 0.043 ± 0.004 | 0.016 | 0.0015 | 1.5 × 10−3 | |
G | 1200 ± 200 | 0.012 ± 0.0006 | 0.01 | 0.00091 | 9.1 × 10−4 | |
C | 6.2 ± 1.7 | 0.065 ± 0.003 | 11 | 1 | 1 | |
N2-MeG | A | 3200 ± 400 | 0.0068 ± 0.0004 | 0.0021 | 0.1 | 1.9 × 10−4 |
T | 1800 ± 300 | 0.0021 ± 0.0001 | 0.0012 | 0.057 | 1.1 × 10−4 | |
G | 84 ± 32 | 0.0052 ± 0.0005 | 0.062 | 3 | 5.6 × 10−3 | |
C | 1300 ± 200 | 0.027 ± 0.001 | 0.021 | 1 | 1.9 × 10−3 | |
N2-BzG | A | 2500 ± 400 | 0.0053 ± 0.0005 | 0.0022 | 52 | 2.0 × 10−4 |
T | 2300 ± 500 | 0.0004 ± 0.000004 | 0.00017 | 4 | 1.5 × 10−5 | |
G | 1600 ± 300 | 0.0006 ± 0.00005 | 0.0004 | 10 | 3.6 × 10−5 | |
C | 2400 ± 600 | 0.0001 ± 0.000002 | 0.000042 | 1 | 3.8 × 10−6 | |
O6-MeG | A | 2800 ± 900 | 0.0029 ± 0.0005 | 0.0011 | 0.058 | 1.0 × 10−4 |
T | 380 ± 60 | 0.014 ± 0.0007 | 0.037 | 1.9 | 3.3 × 10−3 | |
G | 2300 ± 200 | 0.0067 ± 0.0004 | 0.0029 | 0.15 | 2.6 × 10−4 | |
C | 1200 ± 200 | 0.022 ± 0.002 | 0.019 | 1 | 1.7 × 10−3 | |
O6-BzG | A | 1500 ± 300 | 0.0017 ± 0.0001 | 0.0011 | 0.18 | 1.0 × 10−4 |
T | 960 ± 30 | 0.003 ± 0.0003 | 0.0031 | 0.51 | 2.8 × 10−4 | |
G | 310 ± 150 | 0.0002 ± 0.00003 | 0.00064 | 0.1 | 5.8 × 10−5 | |
C | 130 ± 60 | 0.0008 ± 0.00008 | 0.0061 | 1 | 5.5 × 10−4 | |
AP site | A | 430 ± 70 | 0.043 ± 0.002 | 0.099 | 40 | 9.0 × 10−3 |
T | 2100 ± 900 | 0.017 ± 0.003 | 0.0081 | 3.2 | 7.4 × 10−4 | |
G | 2300 ± 700 | 0.043 ± 0.007 | 0.019 | 7.6 | 1.7 × 10−3 | |
C | 830 ± 250 | 0.0021 ± 0.0002 | 0.0025 | 1 | 2.3 × 10−4 |
Misinsertion frequency, calculated by dividing kcat/Km for dNTP incorporation by the kcat/Km for dCTP incorporation opposite each template base.
Relative insertion efficiency, calculated by dividing kcat/Km for dNTP incorporation opposite each template base by the kcat/Km for dCTP incorporation opposite template G.