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. Author manuscript; available in PMC: 2013 Jun 15.
Published in final edited form as: Chem Res Toxicol. 2012 Jul 31;25(8):1699–1707. doi: 10.1021/tx300168p

Table 3.

Steady-State Kinetic Parameters for dNTP Incorporation Opposite DNA Lesions by Dpo4

template base dNTP Km (µM) kcat (s−1) kcat/Km (mM−1 s−1) fins a relative effciencyb
G A 880 ± 80 0.0028 ± 0.00009 0.0032 0.0001 1 × 10−4
T 940 ± 220 0.021 ± 0.002 0.022 0.00071 7.1 × 10−4
G 430 ± 50 0.0045 ± 0.0002 0.01 0.00032 3.2 × 10−4
C 12 ± 3 0.38 ± 0.02 31 1 1
N2-MeG A 790 ± 30 0.0027 ± 0.00004 0.0034 0.00015 1.1 × 10−4
T 1300 ± 200 0.025 ± 0.002 0.019 0.00083 6.1 × 10−4
G 250 ± 30 0.0049 ± 0.0002 0.019 0.00083 6.1 × 10−4
C 4.1 ± 1.8 0.092 ± 0.006 23 1 7.4 × 10−1
N2-BzG A 590 ± 90 0.0016 ± 0.00008 0.0026 0.0011 8.4 × 10−5
T 110 ± 80 0.00019 ± 0.00005 0.0016 0.00067 5.2 × 10−5
G 50 ± 16 0.0016 ± 0.0001 0.03 0.0125 9.7 × 10−4
C 26 ± 7 0.0062 ± 0.004 2.4 1 7.7 × 10−2
O6-MeG A 2200 ± 300 0.0036 ± 0.0002 0.0016 0.013 5.2 × 10−5
T 3800 ± 1200 0.063 ± 0.01 0.017 0.14 5.5 × 10−4
G 12 ± 5 0.00032 ± 0.00002 0.027 0.23 8.7 × 10−4
C 45 ± 12 0.0055 ± 0.0004 0.12 1 3.9 × 10−3
O6-BzG A 1200 ± 200 0.0012 ± 0.00007 0.001 0.0091 3.2 × 10−5
T 870 ± 40 0.0023 ± 0.00004 0.0026 0.024 8.4 × 10−5
G 77 ± 23 0.00055 ± 0.00004 0.0065 0.059 2.1 × 10−4
C 52 ± 20 0.0057 ± 0.0005 0.11 1 3.5 × 10−3
AP site A 1100 ± 200 0.021 ± 0.003 0.02 0.24 6.5 × 10−4
T 8900 ± 800 0.025 ± 0.002 0.0028 0.034 9.0 × 10−5
G 600 ± 140 0.0033 ± 0.0002 0.0055 0.066 1.8 × 10−4
C 27 ± 8 0.0022 ± 0.0002 0.083 1 2.7 × 10−3
a

Misinsertion frequency, calculated by dividing kcat/Km for dNTP incorporation by the kcat/Km for dCTP incorporation opposite each template base.

b

Relative insertion efficiency, calculated by dividing kcat/Km for dNTP incorporation opposite each template base by the kcat/Km for dCTP incorporation opposite template G.