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. Author manuscript; available in PMC: 2014 May 15.
Published in final edited form as: Bioorg Med Chem. 2013 Mar 21;21(10):2720–2726. doi: 10.1016/j.bmc.2013.03.010

Table 1.

UV-melting data for decoding region analogues.

Analogues ΔG°37 (kcal/mol) ΔΔG°37 (kcal/mol) ΔH° (kcal/mol) ΔS° (cal/K· mol) Tm(°C)
E. coli analogues
C-C-U −10.9 ± 0.2 0 −49 ± 5 −122 ± 15 65.6
m4Cm-C-U −12.2 ± 0.2 −1.3 −61 ± 4 −156 ± 13 68.9
C-m5C-U −10.3 ± 0.2 0.6 −48 ± 5 −120 ± 17 63.6
C-C-m3U −10.7 ± 0.2 0.2 −51 ± 7 −129 ± 21 63.3
Cm-C-U −11.5 ± 0.2 −0.6 −55 ± 5 −141 ± 17 66.3
m4Cm-m5C-U −11.4 ± 0.2 −0.5 −58 ± 7 −149 ± 21 66.1
m4Cm-C-m3U −11.3 ± 0.2 −0.4 −55 ± 7 −141 ± 21 66.3
C-m5C-m3U −10.5 ± 0.2 0.4 −47 ± 6 −119 ± 20 65.4
m4Cm-m5C-m3U −11.3 ± 0.2 −0.4 −57 ± 7 −148 ± 21 65.6

C. acetobutylicum −11.4 ± 0.2 −0.5 −58 ± 7 −149 ± 21 66.1

T. thermophilus −11.7 ± 0.2 −0.8 −61 ± 6 −159 ± 20 66.3

Buffer conditions: 20 mM sodium cacodylate, 1 M NaCl, 0.5 mM Na2EDTA, pH 7.0.