Table 4.
Functional annotation clusters of genes differentially expressed in response to thermal stress by alternative (2La or 2L+a) karyotypes
Stress responsive genes | Annotation Cluster (representative annotation terms) | Gene count | Enrichment score |
---|---|---|---|
2La/Up | 1 Proteasome complex | 45 | 4.47 |
2 Translation/translation initiation factor | 33 | 3.79 | |
3 Tetratricopeptide (TPR) repeat | 14 | 3.56 | |
4 Protein catabolism | 53 | 3.31 | |
5 Tricarboxylic acid (TCA) cycle/cellular respiration | 25 | 3.11 | |
6 PCI (proteasome, CSN, eIF3) domain | 9 | 2.94 | |
7 Proteosome complex/proteolysis | 50 | 2.92 | |
8 Chaperonin (Cpn60/TCP-1) | 10 | 2.77 | |
9 ATP binding | 75 | 1.97 | |
10 U-box/ubiquitin ligase | 19 | 1.92 | |
11 Beta-ketoacyl synthase (fatty acid biosynthesis) | 4 | 1.68 | |
2La/Down | --- | --- | --- |
2L+a/Up | --- | --- | --- |
2L+a/Down | 12 TCP-1/cpn60 chaperonin | 6 | 2.32 |
13 Proteasome/proteolysis | 36 | 2.28 | |
14 Protein transport/localization | 9 | 1.31 |