Table 3.
Type of selection | Codon | Models (S, F, R, M) |
---|---|---|
Episodic diversifying | 26 | M |
301 | M | |
57 | M | |
Positive | 26 | F, M |
Negative | 29 | F, R |
36 | F, R | |
42 | S, F, R | |
43 | S, F, R | |
49 | S, F, R | |
54 | F, R | |
58 | S, F, R | |
62 | F, R |
S, single likelihood ancestor counting; F, fixed effects likelihood; and R, the less conservative random effects likelihood. M, episodic selection is based on significant results from mixed effects model evolution. Significance was determined with α < 0.05 or Bayes Factor >50, respective to the likelihood model.
Denotes ABS site based on Brown et al. (1993).