Table 1.
Resubmission errors, cross-validation errors and area under the curves from simulated data including 10 SNPs and 1000 subjects using four different classifiers of logistic regression, classification trees, random forests, and logic regression.
Variables identified | Resubmission Error |
Cross- validation error |
AUC | |
---|---|---|---|---|
Logistic Regression | snp1&snp2 | 0.3350 | 0.3481 | 0.6836 |
snp1&snp4 | ||||
snp2&snp3 | ||||
snp2&snp4 | ||||
snp3&snp4 | ||||
Classification Trees | snp1&snp4&snp10 | 0.3250 | 0.3257 | 0.6853 |
snp1&snp2 | ||||
snp1&snp10 | ||||
Logic Regression | snp1&snp2 | 0.2880 | 0.3220 | 0.7110 |
snp3&snp4 | ||||
Random Forests | snp1&snp2 | 0.2200 | 0.2224 | 0.8795 |
snp3&snp4 |