Table 10.
SNPs associated with protein yielda
|
SNP |
Gene |
Least-squares means (SEM) |
Linear |
Dominance |
|||||
|---|---|---|---|---|---|---|---|---|---|
| 0 | 1 | 2 | Effect | P value | Q value | P value | Q value | ||
| rs43114141 |
AVP |
−3.77 (2.96) |
2.87 (2.35) |
5.42 (2.48) |
4.42 |
0.0144 |
0.0800 |
0.4680 |
0.7313 |
| rs137601357 |
CAST |
9.16 (3.09) |
5.14 (2.00) |
−1.52 (2.37) |
−5.53 |
0.0028 |
0.0575 |
0.6131 |
0.7424 |
| rs109621328 |
CD14 |
−39.70 (12.16) |
−0.10 (3.65) |
5.04 (1.58) |
9.79 |
0.0035 |
0.0575 |
0.0146 |
0.3650 |
| rs41857027 |
CFDP2 |
12.23 (4.90) |
−1.35 (3.47) |
4.31 (1.89) |
−1.17 |
0.6037 |
0.4223 |
0.0209 |
0.3919 |
| rs133449166 |
CSNK1E |
10.22 (3.21) |
4.36 (2.12) |
−0.42 (2.35) |
−5.23 |
0.0046 |
0.0575 |
0.8397 |
0.7524 |
| rs133175991 |
DZIP3 |
−4.58 (7.33) |
−0.03 (2.67) |
6.11 (1.96) |
5.84 |
0.0206 |
0.0942 |
0.8601 |
0.7589 |
| rs43676052 |
EPAS1 |
−2.57 (6.94) |
0.11 (2.28) |
5.63 (1.83) |
5.02 |
0.0307 |
0.1171 |
0.7324 |
0.7424 |
| rs135071345 |
FAM5C |
4.42 (8.71) |
7.84 (2.59) |
1.09 (1.72) |
−5.28 |
0.0383 |
0.1226 |
0.3144 |
0.7275 |
| rs109247499 |
FST |
6.97 (2.66) |
5.29 (2.03) |
−3.76 (2.64) |
−5.37 |
0.0033 |
0.0575 |
0.1623 |
0.6407 |
| rs109830880 |
GCNT3 |
14.32 (12.06) |
10.53 (3.41) |
1.60 (1.99) |
−8.26 |
0.0126 |
0.0788 |
0.7110 |
0.7424 |
| rs110828053 |
HSD17B7 |
−2.55 (6.34) |
−2.60 (2.45) |
5.19 (1.78) |
6.14 |
0.0073 |
0.0729 |
0.3258 |
0.7275 |
| rs133497176 |
NFKBIL1 |
−16.34 (8.03) |
9.12 (2.91) |
2.02 (1.67) |
−1.10 |
0.6802 |
0.4316 |
0.0010 |
0.0750 |
| rs109383758 |
NLRP9 |
0.15 (2.64) |
1.30 (2.01) |
8.03 (2.60) |
3.97 |
0.0226 |
0.0942 |
0.2734 |
0.7275 |
| rs111027720 |
PARM1 |
1.28 (2.84) |
1.13 (2.04) |
8.95 (2.45) |
4.15 |
0.0211 |
0.0942 |
0.1269 |
0.6309 |
| rs109506766 |
PGR |
−4.20 (3.59) |
2.38 (2.06) |
6.25 (2.15) |
4.85 |
0.0102 |
0.0729 |
0.6220 |
0.7424 |
| rs109629628 |
PMM2 |
10.21 (3.60) |
4.58 (2.09) |
0.05 (2.29) |
−4.94 |
0.0095 |
0.0729 |
0.8427 |
0.7524 |
| rs43572154 |
ROR2 |
−6.90 (9.46) |
−1.15 (2.61) |
4.30 (1.72) |
5.49 |
0.0328 |
0.1171 |
0.9776 |
0.7789 |
| rs43321188 |
SERPINE2 |
−5.56 (4.72) |
2.32 (2.29) |
5.06 (1.90) |
4.21 |
0.0413 |
0.1226 |
0.4365 |
0.7275 |
| rs134031231 | TXN2 | 3.77 (3.14) | 7.53 (2.00) | −1.97 (2.41) | −3.81 | 0.0417 | 0.12264 | 0.0135 | 0.3650 |
aSingle nucleotide polymorphism represented as the rs number given by the National Center for Biotechnology Information database SNP.