Table 12.
SNPs associated with somatic cell scorea
|
SNP |
Gene |
Least-squares means (SEM) |
Linear |
Dominance |
|||||
|---|---|---|---|---|---|---|---|---|---|
| 0 | 1 | 2 | Effect | P value | Q value | P value | Q value | ||
| rs110127056 |
ASL |
4.36 (0.16) |
3.87 (0.11) |
4.04 (0.14) |
−0.13 |
0.2141 |
0.5831 |
0.0305 |
0.3684 |
| rs133674837 |
BDH2 |
3.81 (0.19) |
4.19 (0.11) |
3.92 (0.12) |
−0.01 |
0.8913 |
0.7535 |
0.0403 |
0.3993 |
| rs109332658 |
C7H19orf60 |
4.65 (0.28) |
3.89 (0.12) |
4.00 (0.11) |
−0.13 |
0.2968 |
0.5831 |
0.0234 |
0.3684 |
| rs133747802 |
CD2 |
3.99 (0.15) |
4.66 (0.25) |
3.92 (0.12) |
−0.28 |
0.0281 |
0.0281 |
0.3365 |
0.5851 |
| rs41857027 |
CFDP2 |
4.31 (0.28) |
4.34 (0.20) |
3.89 (0.10) |
0.26 |
0.0394 |
0.0394 |
0.6166 |
0.5851 |
| rs134432442 |
CPSF1 |
3.73 (0.32) |
3.83 (0.13) |
4.14 (0.10) |
0.26 |
0.0394 |
0.0394 |
0.6166 |
0.5851 |
| rs109503725 |
DSC2 |
3.80 (0.14) |
3.88 (0.11) |
4.48 (0.14) |
0.34 |
0.0008 |
0.0008 |
0.0846 |
0.3993 |
| rs109247499 |
FST |
3.90 (0.14) |
3.89 (0.11) |
4.41 (0.14) |
0.25 |
0.0083 |
0.0083 |
0.0759 |
0.3993 |
| rs133497176 |
NFKBIL1 |
6.52 (0.45) |
3.91 (0.16) |
3.97 (0.09) |
−0.42 |
0.0030 |
0.1167 |
0.0001 |
0.0054 |
| rs109629628 |
PMM2 |
3.84 (0.20) |
3.90 (0.11) |
4.24 (0.12) |
0.23 |
0.0359 |
0.0359 |
0.4032 |
0.5851 |
| rs136746215 |
SEC14L1 |
4.19 (0.11) |
3.99 (0.14) |
3.88 (0.08) |
−0.15 |
0.0183 |
0.0183 |
0.7550 |
0.5851 |
| rs132789482 |
TSHB |
4.49 (0.30) |
3.81 (0.11) |
3.95 (0.06) |
−0.02 |
0.8513 |
0.7535 |
0.0307 |
0.3684 |
| rs134031231 | TXN2 | 3.83 (0.17) | 3.94 (0.10) | 4.26 (0.13) | 0.23 | 0.0352 | 0.0352 | 0.5155 | 0.5851 |
aSingle nucleotide polymorphism represented as the rs number given by the National Center for Biotechnology Information database SNP.