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. 2013 Jun 5;7(1):14. doi: 10.1186/1479-7364-7-14

Table 1.

Summary of genes and SNPs identified by meta-analysis to be positively correlated with various cancers

Gene
Cancer type
SNPs
References
Supporting references
    rs number Other name    
ERCC2
BC
rs13181
p.K715Q
[12,13]
[14-17]
ERCC2
BC
rs1799793
p.D312N
[12,18]
[14-16]
ERCC2
LC
rs13181
p.K751Q
[19,20]
[17,21,22]
ERCC2
LC
rs1799793
p.D312N
[23]
[17,21,22]
CCND1
BC
rs603965
c.870G>A
[24]
[25-31]
CYP2E1
CRC
rs3813867
NA
[32]
[32-41]a
CYP2E1
HNC
rs3813867
NA
[42,43]
[44]
CYP2E1
HNC
rs6413432
NA
[42]
[44]
GSTP1
CRC
rs1695
p.I105V
[45]
[39,46-55]
IL6
BC
rs1800795
c.-174G>C
[56,57]
 
MTHFR
GC
rs1801131
c.1298A>C
[58]
[59,60]b
MTHFR
BC
rs1801131
c.677C>T, c.1298A>C
[61,62]
[63,64]
SOD2
BC
rs4880
p.V16A, p.A9V
[62,65,66]
 
TGFB1
BC
rs1800469
NA
[67-69]
 
TGFB1
BC
rs1800470
NA
[67,70-73]
 
TGFB1
BC
rs1982073
NA
[74]
[64,75-77]
TP53
BC
rs1042522
p.R72P
[78,79]
[80-94]
TP53
UBC
rs1042522
p.R72P
[95]
[96-100]
TP53
CRC
rs1042522
p.R72P
[78,101-103]
[104-108]
TP53
CRC
rs17878362
NA
[78]
[104-108]
TP53
EC
rs1042522
p.R72P
[109,110]
[111]
TP53
LC
rs1042522
p.R72P
[78]
[112-117]
TP53
LC
rs17878362
NA
[78]
[112-117]
VEGFA BC rs3025039, rs699947 c.936C>T, c.-2578C>A [20,45,118,119] [120]

These findings are supported by the published literature. aFor a different SNP (rs1329149); bfor c.677C>T and c.1298A>C. NA not available.