Table 1. Differential population of the mRNA transcripts induced by 24-epibrassinosteroid (EBR) in phloem sap of cucumber plants.
Clone name | Accession Number | Annotation | Best homologs in Cucumis sativus | E-value | GO biological process |
Cs564 | JG391944 | DNA binding/methylated histone residue binding | Csa009901 | 3.00E-24 | regulation transcription |
Cs74 | JG391952 | Zinc finger CCCH-type with G patch domain-containing protein | Csa016350 | 5.00E-58 | regulation transcription |
Cs642 | JG391945 | 40S ribosomal protein S7 | Csa004617 | 1.00E-78 | translation |
Cs140 | JG391953 | 60S ribosomal protein L38 | Csa007567 | 1.00E-16 | translation |
Cs418 | JG391947 | tRNA-binding region domain-containing protein | Csa016058 | 1.00E-68 | translation |
Cs60 | JG391942 | ATG8C (autophagy 8c); microtubule binding | Csa026450 | 4.00E-61 | protein transport |
Cs623 | JG391955 | MLP-like protein 328 | Csa010594 | 0 | defense response |
Cs579 | JG391948 | Ankyrin repeat domain-containing protein 2 | Csa013665 | 4.00E-48 | defense response |
Cs453 | JG391949 | Auxin-responsive protein IAA14 | Csa000125 | 3.00E-57 | response to wounding |
Cs594 | JG391950 | F-box protein PP2-A14 | Csa012410 | 0 | response to wounding |
Cs681 | JG391943 | Yippee putative zinc-binding protein | Csa005548 | 1.00E-101 | unknown |
Cs658 | JG391946 | Unknown | Csa003458 | 1.00E-112 | |
Cs526 | JG391954 | Unknown | Csa003457 | 1.00E-116 | |
Cs302 | JG391951 | Unknown | Csa012053 | 6.00E-67 |
EBR-induced changes in the population of mRNAs in the phloem sap of cucumber plants were determined by suppressive subtractive hybridization (SSH) methods. Mature leaves of seven-leaf stage plants were treated with distilled water (DW) or 0.2 µM EBR and phloem sap was collected from stem cut close to apex and at petioles during various time intervals (3, 6, 9 and 24 h) after treatment. RNA was extracted from pooled samples for use in SSH analysis. Data presented reflects the mRNA species up-regulated in EBR-treated vs DW-treated phloem sap.