Table 4. TCA cycle enzymes present in the T. scripta developmental transcriptome.
EC number | Enzyme name | Genbank accession numbers |
1.1.1.37 | Malate dehydrogenase | JW457473, JW460952 |
1.1.1.41 | Isocitrate dehydrogenase (NAD+) | JW313702, JW460801, JW464649 |
1.1.1.42 | Isocitrate dehydrogenase (NADP+) | JW315818, JW459818, JW460815 |
1.2.4.1 | Pyruvate dehydrogenase (acetyl-transferring) | JW458559, JW463459 |
1.2.4.2 | Oxoglutarate dehydrogenase (succinyl-transferring) | JW425409, JW443178, JW460829, JW489499, JW460830, JW460831 |
1.3.5.1 | Succinate dehydrogenase (ubiquinone) | JW460432, JW463499 |
1.3.99.1 | Succinate dehydrogenase | JW317082, JW461916 |
1.8.1.4 | Dihydrolipoyl dehydrogenase | JW459096 |
2.3.1.12 | Dihydrolipoyllysine-residue acetyltransferase | JW313827 |
2.3.1.61 | Dihydrolipoyllysine-residue succinyltransferase | JW464483 |
2.3.3.1 | Citrate (Si)-synthase | JW458401, JW459037 |
2.3.3.8 | ATP citrate synthase | JW305869, JW460741, JW460742 |
4.1.1.32 | Phosphoenolpyruvate carboxykinase (GTP) | JW288259, JW288260, JW461270, JW461271 |
4.1.3.6 | Citrate (pro-3S)-lyase | JW402608, JW460741, JW460742 |
4.2.1.2 | Fumarate hydratase | JW319039 |
4.2.1.3 | Aconitate hydratase | JW321248, JW461661 |
6.2.1.4 | Succinate–CoA ligase (GDP-forming) | JW305869, JW310451 |
6.2.1.5 | Succinate–CoA ligase (ADP-forming) | JW305869, JW460741, JW463477, JW460742 |
6.4.1.1 | Pyruvate carboxylase | JW314460 |
Predicted proteins in the transcriptome were mapped to the TCA KEGG metabolic pathway using Blast2Go.