Table 3.
Trimer | Monomer | Interaction energy (kcal/mol) | % change from homotetramer | Protein stability (kcal/mol) | % change from homotetramer |
---|---|---|---|---|---|
ALDH1A1 | ALDH1A1 | −352.75 | – | −102570.56 | – |
ALDH1A1 | ALDH1A1 homology from ALDH2 | −320.00 | 9.28 | −102306.17 | 0.26 |
ALDH2 | ALDH2 | −363.90 | – | −109639.68 | – |
ALDH2 | ALDH2 homology from ALDH1A1 | −281.96 | 22.52 | −109915.10 | −0.25 |
ALDH2 | ALDH2*2 | −323.77 | 11.03 | −109298.92 | 0.31 |
ALDH1B1 | ALDH1B1 | −308.87 | – | −115686.15 | – |
ALDH1B1 | ALDH2 | −445.60 | −44.27 | −114127.71 | 1.35 |
ALDH1B1 | ALDH2*2 | −367.23 | −18.89 | −114295.66 | 1.20 |
Energies for the binding of an ALDH monomer to an ALDH trimer were calculated in silico. The interaction energy parameter for each indicates the energy of interaction between the monomer and the trimer, whereas the protein stability parameter represents the calculated total stability of the final protein tetramer in solution.