Table 1.
Similarity values of 16S rRNA gene sequences retrieved from rumen of Surti buffalo.
| Phylotypes (OTUs) | Clone no. | Accession no. | Genera | Nearest Taxa (Accession no.) |
Identity (%) |
|---|---|---|---|---|---|
| ORFSBRM1 | 9 | HM566228 | Methanobrevibacter sp. | Uncultured Methanobrevibacter sp. (HM125682) |
96 |
| ORFSBRM2 | 10 | HM566229 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616023.1 |
97 |
| ORFSBRM3 | 1 | HM566230 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616006.1 |
93 |
| ORFSBRM4 | 1 | HM566231 | N/A | Uncultured archaeon clone sy-904231054-77-i GQ255495.1 |
94 |
| ORFSBRM5 | 15 | HM566232 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616023.1 |
98 |
| ORFSBRM6 | 1 | HM566233 | N/A | Uncultured archaeon clone sy-904231051-84-i GQ255499.1 |
98 |
| ORFSBRM7 | 5 | HM566234 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616006.1 |
94 |
| ORFSBRM8 | 2 | HM566235 | N/A | Uncultured methanogenic archaeon EU794774.1 |
90 |
| ORFSBRM9 | 1 | HM566236 | N/A | Uncultured archaeon clone sy-904231051-40-i GQ255534.1 |
95 |
| ORFSBRM10 | 1 | HM566237 | N/A | Uncultured archaeon clone sy-904231051-84-i GQ255499.1 |
98 |
| ORFSBRM11 | 9 | HM566238 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616023.1 |
98 |
| ORFSBRM12 | 2 | HM566239 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HM038371.1 |
98 |
| ORFSBRM13 | 2 | HM566240 | Methanobrevibacter sp. | Uncultured Methanobrevibacter sp. FJ919272.1 |
97 |
| ORFSBRM14 | 3 | HM566241 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616023.1 |
98 |
| ORFSBRM15 | 2 | HM566242 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616006.1 |
94 |
| ORFSBRM16 | 2 | HM566243 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616023.1 |
94 |
| ORFSBRM17 | 1 | HM566244 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616023.1 |
98 |
| ORFSBRM18 | 2 | HM566245 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616023.1 |
99 |
| ORFSBRM19 | 2 | HM566246 | Methanomicrobium sp. | Uncultured Methanomicrobium sp. HQ616023.1 |
99 |
| ORFSBRM20 | 1 | HM566247 | Methanomicrobium mobile |
Methanomicrobium mobile
M59142.1 |
99 |
| ORFSBRM21 | 4 | HM566248 | Uncultured Methanobacteriales | Uncultured Methanobacteriales archaeon DQ402018.1 | 98 |
Total clones = 76.