Table 5.
Frequency of potential sORFs sharing domains with larger polypeptides of the same genome.
Genome | No hit | <e−5 | <e−10 | >e−10 | Total |
---|---|---|---|---|---|
P. vulgaris | 1200 | 3768 | 757 | 818 | 6170 |
G. max | 6265 | 3265 | 340 | 591 | 10,461 |
M. truncatula | 20,301 | 1972 | 195 | 53 | 30,521 |
L. japonicus | 18,677 | 3697 | 694 | 531 | 23,599 |
BLASTP analyses were performed with predicted SPs (<120 aa) against all other proteins (longer than 120 aa) in each legume genome. Obtained e values were used to cluster SPs according to similarity to other proteins.