Table 1.
The recombinating repeat regions and recombination rates
| Repeat | Length | Copy | Direction | Position | Recombination ratea |
|---|---|---|---|---|---|
| A | 1215 | a | + | 404090..841 | 0.33 |
| b | + | 193239..194455 | |||
| B | 110 | a | + | 68512..68621 | 0.07 (a <=> b) |
| b | − | 210611..210720 | |||
| c | + | 254685..254794 | 0.14 (c <=> d) | ||
| d | − | 361196..361305 | |||
| C | 62 | a | + | 101337..101598 | 0.11 |
| b | − | 341474..341735 | |||
| D | 321 | a | + | 113798..114118 | 0.08 |
| b | − | 355759..356079 | |||
| E | 137 | a | + | 114018..114154 | 0.12 |
| b | − | 146537..146673 | |||
| H | 116 | a | + | 114074..114189 | 0.09 |
| b | − | 402480..402595 | |||
| I | 204 | a | + | 122790..122993 | 0.09 |
| b | − | 175077..175281 | |||
| J | 149 | a | + | 177524..177672 | 0.09 |
| b | − | 289080..289228 | |||
| K | 235 | a | + | 250286..250520 | 0.24 |
| b | + | 341889..342123 | |||
| L | 123 | a | + | 259471..259599 | 0.21 |
| b | + | 276277..276396 | |||
| M | 103 | a | + | 289083..289185 | 0.07 |
| b | + | 344990..345101 | |||
| N | 81 | a | + | 114074..114154 | 0.05 (a <=> c) |
| b | − | 146537..146617 | |||
| c | − | 402515..402595 |
a
The recombining repeat copies are indicated in parentheses when there are three or more copies of the repeat sequences.