Table 3.
Proteins of interest identified by iGEO and nano-LC-MS/MS analysis, cross-referenced to their presence in the MudPIT data sets
| |
|
|
|
|
|
Presence in MudPIT data set |
||
|---|---|---|---|---|---|---|---|---|
| Spot ID | Flybase ID | Protein ID | Function | MW | pI | Embryo 1 | Embryo 2 | S2 cell |
| 38 |
CG16916 |
Rpt3 |
26S Proteasome Subunit |
47 |
5.0 |
- |
- |
+ |
| 40 |
CG8983 |
ERp60 |
Protein disulfide isomerase homolog |
55 |
5.6 |
- |
- |
+ |
| 63 |
CG1341 |
Rpt1 |
26S Proteasome Subunit |
48 |
5.8 |
- |
- |
- |
| 64 |
CG32528 |
Parvin |
Parvin |
42 |
6.6 |
+ |
+ |
+ |
| 66 |
CG8863 |
Droj2 |
DnaJ-like-2 chaperone |
45 |
6.4 |
- |
- |
+ |
| 92 |
CG4904 |
Pros35 |
Proteasome 35kDa subunit |
31 |
6.5 |
- |
- |
+ |
| 111 | CG9031 | RSU-1 | RSU-1 isoform | 31 | 6.6 | + | + | + |
Raw data of MASCOT search results are available in Additional file 7: MASCOT raw data.