Table 1. Primers utilized in this study.
Name | Target | Sequence (5′ to 3′) |
JVS1L | lytA | AGTTTAAGCATGATATTGAGAAC |
JVS2R | TTCGTTGAAATAGTACCACTTAT | |
JVS5L | luxS | ACATCATCTCCAATTATGATATTC |
JVS6R | GACATCTTCCCAAGTAGTAGTTTC | |
JVS27L | cps4A | CGTCTAAGAGTCAGTCTTTCAATA |
JVS28R | ATTGATATCCACTCCATAGAGATT | |
JVS29L | nana | CAGTGATAGAAAAAGAAGATGTTG |
JVS30R | ATTATTGTAAACTGCCATAGTGAA | |
JVS31L | mgrA | ATCTGTATCGTCAAGAGTTGTTTA |
JVS32R | TAAAACCTTTAGTTTAGGCTGATT | |
JVS35L | 16S rRNA | AACCAAGTAACTTTGAAAGAAGAC |
JVS36R | AAATTTAGAATCGTGGAATTTTT | |
JVS53L | comD | AACAGTATGAGAGGGATAGAGGAC |
JVS54R | GATAAAGGTAGTCCTCGTCAAAAT | |
JVS55L | comC | ATGAAAAACACAGTTAAATTGGAA |
JVS56R | TTGTAAAATAAAATCACGGAAGAA | |
JVS57L | pspA | CATAGACTAGAACAAGAGCTCAAA |
JVS58R | CTACATTATTGTTTTCTTCAGCAG | |
JVS59L | Ply | TGAGACTAAGGTTACAGCTTACAG |
JVS60R | CTAATTTTGACAGAGAGATTACGA | |
JVS61L | nanB | AACTGTCCATATCTCCTATTTTTC |
JVS62R | TATTTCTACACCTATCTCACCAGA | |
JVS63L | lytC | GTCTAGGTTATAGCGGTAAAGAAG |
JVS64R | GCTCTTATTTACATATTCCCAGTT | |
JVS65L | pavA | CGATAAAAGCAGTCATAAAATCCT |
JVS66R | AGGATTGAGAGATTCTGTACTTGG | |
JVS67L | Iga | CGAATGGCACAAAGATTAAACA |
JVS68R | TTCTTCCCTTGAAACTGCTCTC | |
JVS69L | rrgB | CAAAACCACTTGATCCAACAGA |
JVS70R | ATTACAAATTCTGCCCCAGCTA | |
JVS73L | cbpA | GCTAATGTAGCGACTTCAGATCAA |
JVS74R | AGCTTGGAAGAGTTTCTTCACCTA | |
JVS75L | psaA | CCTGCTGAAAAGAAACTCATTGTA |
JVS76R | AGGTCTTGATTTGTTCAGGAGTTC | |
JVS77L | psrP | GCTGCTAGAACTCCAAGTAACACA |
JVS78R | TCACAAGTTGGAAATACTTCTGGA | |
JVS79L | codY | TATAACGCATAAAATAGCCAAGCA |
JVS80R | ATTACATCAATTTTGAAACGCTCA | |
JVS81L | cbpD | TCCTGTTGATTTAGAACCATTTGA |
JVS82R | GAGGGAGTGACTTCTTCACAAAAT | |
JVS83L | Eno | GACGGTACTCCTAACAAAGGTAAA |
JVS84R | ATAGCTGTAAAGTGGGATTTCAAG | |
1406F* | rrn, intergenic spacer region | TGYACACACCGCCCGT |
23Sr* | GGGTTBCCCCATTCRG |
From ref (44).