Table 2. List of genes found in Lilium longiflorum chloroplast genome.
| Group of gene |
Name of gene* | No. | |||
|---|---|---|---|---|---|
| RNA genes | Ribosomal RNAs | rrn4.5(x2), rrn5(x2), rrn16(x2), rrn23(x2) | 8 | ||
| Transfer RNAs | trnA-UGCa(x2), trnC-GCA, trnD-GUC, trnE-UUC, trnF-GAA, trnfM-CAU, trnG-UCC, trnH-GUG(x2), trnI-CAU(x2), trnI-GAUa(x2), trnK-UUUa, trnL-CAA(x2), trnL-UAAa, trnL-UAG, trnM-CAU, trnN-GUU(x2), trnP-UGG, trnQ-UUG, trnR-ACG(x2), trnR-UCU, trnS-GCU, trnS-GGA, trnS-UGA, trnT-GGU, trnT-UGU, trnV-GAC(x2), trnV-UACa, trnW-CCA, trnY-GUA | 37 | |||
| Protein genes | Photosynthesis | ||||
| Photosystem I | psaA, psaB, psaC, psaI, psaJ | 5 | |||
| Photosystem II | psbA, psbB, psbC, psbD, psbE, psbF, psbH, psbI, psbJ, psbK, psbL, psbM, psbN, psbT, psbZ | 15 | |||
| Cytochrome | petA, petBa, petDa, petG, petL, petN | 6 | |||
| ATP synthase | atpA, atpB, atpE, atpFa, atpH, atpI | 6 | |||
| Rubisco | rbcL | 1 | |||
| NADH dehydrogenease | ndhAa, ndhBa(x2), ndhC, ndhD, ndhE, ndhF, ndhG, ndhH, ndhI, ndhJ, ndhK | 12 | |||
| ATP-dependent protease subunit P | clpPa | 1 | |||
| Chloroplast envelope membrane protein | cemA | 1 | |||
| Ribosomal proteins | large units | rpl2a(x2), rpl14, rpl16a, rpl20, rpl22, rpl23(x2), rpl32, rpl33, rpl36 | 11 | ||
| small units | rps2, rps3, rps 4, rps7(x2), rps8, rps11, rps12a(x2), rps14, rps15, rps16a,rps18, rps19(x2) | 15 | |||
| Transcription | RNA polymerase | rpoA, rpoB, rpoC1a, rpoC2 | 4 | ||
| /trnslation | Initiation factor | infA | 1 | ||
| Miscellaneous proteins | accD, ccsA, matK | 3 | |||
| Hypothetical proteins & Conserved reading frame | ycf1(x2), ycf2(x2), ycf3a, ycf4, ycf15(x2), ycf68(x2) | 10 | |||
| Total | 136 | ||||
* (x2): duplicated genes, a genes having introns