Table 2. Deficiency in ArgEF or CpcA but not ArgB decreases the cellular ornithine content.
5 mM arginine | 1 mM arginine | 1 mM arginine | 0.2 mM arginine | ||
aa | ΔargEF/ΔakuB | ΔargEF/ΔakuB | ΔargB /Af293 | ΔargB /Af293 | ΔcpcA /D141 |
Ala | 0.86 | 0.90 | 1.30 | 1.51 | 0.52 |
Arg | 0.94 | 0.97 | 1.09 | 0.56 | 0.93 |
Asn | 0.98 | 1.00 | 0.93 | 1.23 | 0.82 |
Asp | 0.97 | 0.85 | 0.76 | 1.15 | 0.73 |
Gln | 1.03 | 0.99 | 0.91 | 0.76 | 1.49 |
Glu | 1.21 | 1.26 | 0.90 | 1.09 | 0.84 |
Gly | 0.69 | 0.60 | 1.14 | 1.36 | 0.90 |
His | 0.79 | 1.36 | 1.07 | 1.37 | 0.90 |
Ile | 0.91 | 0.88 | 1.28 | 1.93 | 0.69 |
Leu | 0.68 | 0.59 | 1.15 | 1.72 | 0.58 |
Lys | 0.77 | 0.72 | 0.80 | 1.10 | 0.67 |
Met | 0.62 | 0.75 | 0.85 | 1.58 | 0.86 |
Orn | 0.15 | 0.02 | 1.55 | 3.12 | 0.45 |
Phe | 0.82 | 0.73 | 1.23 | 2.00 | 0.56 |
Ser | 0.99 | 0.97 | 0.92 | 1.33 | 0.82 |
Thr | 1.00 | 1.07 | 0.99 | 1.48 | 0.61 |
Trp | 0.51 | 0.43 | 1.31 | 1.58 | 0.40 |
Tyr | 0.78 | 0.63 | 1.14 | 2.61 | 0.59 |
Val | 0.78 | 0.79 | 1.41 | 2.01 | 0.59 |
ΔakuB and ΔargEF were supplemented either with 5 or 1 mM arginine; Af293 and ΔargB were supplemented either with 1 or 0.2 mM arginine. Individual amino acid pools are given in % of the total free amino acids and normalized to that of the respective wt. Amino acid pools up- or down-regulated >1.5- and >3-fold in mutant strain versus wt are in bold and bold, respectively. Given values represent the mean of three biological replicates, the standard deviations are given in Table S4.