Table 4.
Allele and genotype frequencies among AA participants of the CHS (N=481).
Gene | SNP | Position | Alleles | MAF | −/− % | −/+ % | +/+ % | HWE pval | % missing |
---|---|---|---|---|---|---|---|---|---|
IL1A | rs2048874 | 113240198 | C>T | 0.09 | 0.84 | 0.14 | 0.02 | 0.02 | 0.02 |
IL1A | rs3783546 | 113251061 | G>C | 0.24 | 0.58 | 0.36 | 0.06 | 0.7 | 0.03 |
IL1A | rs17561 | 113253454 | G>T | 0.18 | 0.04 | 0.28 | 0.68 | 0.34 | 0.04 |
IL1A | rs3783538 | 113254426 | T>C | 0 | 0.99 | 0.01 | 0 | 1 | 0.02 |
IL1A | rs2856838 | 113256203 | C>T | 0.39 | 0.17 | 0.44 | 0.39 | 0.1 | 0.03 |
IL1A | rs1800587 | 113259191 | C>T | 0.4 | 0.25 | 0.3 | 0.45 | <.00001 | 0.15 |
IL1A | rs6722023 | 113262098 | C>T | 0 | 0 | 0 | 0.99 | 0.01 | 0.04 |
IL1A | rs17042407 | 113275145 | T>C | 0.2 | 0.02 | 0.34 | 0.63 | 0.05 | 0.05 |
IL1A | rs4849122 | 113277152 | A>G | 0.01 | 0.97 | 0.03 | 0 | 1 | 0.03 |
IL1A | rs7585707 | 113285576 | T>C | 0.36 | 0.13 | 0.46 | 0.41 | 0.92 | 0.02 |
IL1B | rs4849125 | 113293146 | G>A* | 0.36 | 0.34 | 0.61 | 0.06 | <.00001 | 0.23 |
IL1B | rs7596684 | 113294434 | T>C | 0.19 | 0.66 | 0.3 | 0.04 | 0.46 | 0.01 |
IL1B | rs3917386 | 113296097 | A>G | 0.01 | 0.98 | 0.02 | 0 | 0.05 | 0.01 |
IL1B | rs3917368 | 113299013 | G>A | 0.19 | 0.66 | 0.31 | 0.03 | 0.88 | 0.01 |
IL1B | rs3917365 | 113302940 | C>T | 0.16 | 0.05 | 0.23 | 0.73 | 0.0009 | 0.04 |
IL1B | rs1143643 | 113304533 | G>A | 0.19 | 0.66 | 0.31 | 0.04 | 1 | 0.02 |
IL1B | rs1143634 | 113306621 | C>T | 0.12 | 0.02 | 0.2 | 0.78 | 0.08 | 0.03 |
IL1B | rs1143627 | 113310618 | C>T* | 0.43 | 0.2 | 0.46 | 0.33 | 0.22 | 0.03 |
IL1RN | rs17042917 | 113586894 | G>A | 0.18 | 0.03 | 0.3 | 0.67 | 0.88 | 0.01 |
IL1RN | rs4251961 | 113590698 | T>C | 0.19 | 0.04 | 0.29 | 0.66 | 0.29 | 0.06 |
IL1RN | rs2637988 | 113593010 | G>A* | 0.45 | 0.21 | 0.48 | 0.31 | 0.57 | 0.07 |
IL1RN | rs4251985 | 113593644 | G>T | 0.09 | 0.83 | 0.16 | 0.01 | 1 | 0.01 |
IL1RN | rs3213448 | 113595528 | G>A | 0.23 | 0.05 | 0.36 | 0.59 | 0.6 | 0.04 |
IL1RN | rs3087263 | 113601999 | G>A | 0.02 | 0.96 | 0.04 | 0 | 0.22 | 0.03 |
IL1RN | rs4252022 | 113606392 | G>A | 0.06 | 0 | 0.11 | 0.89 | 1 | 0 |
IL1RN | rs315951 | 113606817 | C>G* | 0.39 | 0.39 | 0.45 | 0.16 | 0.24 | 0.03 |
IL1RN | rs4252041 | 113606841 | C>T | 0.01 | 0.98 | 0.01 | 0 | 0.03 | 0.12 |
IL1RN | rs315938 | 113612276 | T>A | 0.12 | 0.78 | 0.21 | 0.01 | 0.82 | 0.08 |
IL1RN | rs17042998 | 113615756 | A>G | 0.01 | 0.98 | 0.02 | 0 | 1 | 0.02 |
IL1RN | rs931471 | 113628924 | C>T* | 0.4 | 0.37 | 0.46 | 0.17 | 0.38 | 0.06 |
IL1RN | rs6739883 | 113630543 | G>A | 0.14 | 0.02 | 0.25 | 0.73 | 0.56 | 0.08 |
Denotes when the minor allele in AAs is different than in Whites.