Table 2.
A paired matrix showing dual FP localization claims for each possible subcellular compartment combination.
| FP localization | Cytoskeleton | Cytosol | ER | Extracellular | Golgi | Mitochondrion | Nucleus | Peroxisome | PM | Plastid | Vacuole |
|---|---|---|---|---|---|---|---|---|---|---|---|
| Cytoskeleton | 63 | ||||||||||
| Cytosol | 11 | 514 | |||||||||
| ER | 3 | 15 | 189 | ||||||||
| Extracellular | 1 | 3 | 1 | 40 | |||||||
| Golgi | 3 | 21 | 28 | 2 | 145 | ||||||
| Mitochondrion | 2 | 12 | 4 | 0 | 2 | 312 | |||||
| Nucleus | 12 | 238 | 13 | 4 | 1 | 8 | 779 | ||||
| Peroxisome | 2 | 11 | 2 | 0 | 1 | 10 | 5 | 130 | |||
| PM | 8 | 45 | 21 | 14 | 22 | 3 | 23 | 0 | 145 | ||
| Plastid | 2 | 16 | 10 | 0 | 2 | 100 | 7 | 8 | 3 | 486 | |
| Vacuole | 1 | 5 | 10 | 1 | 10 | 0 | 2 | 2 | 7 | 2 | 93 |
In total, 739 claims are listed, comprising 545 distinct proteins that have been localized to at least two different cellular compartments by FP tagging. The matrix diagonal shows the set of proteins claimed in each compartment. In the matrix below the diagonal, the two-way comparisons of claims for proteins to be present in different compartments are shown. Data sets were extracted from the SUBA3 database (http://suba.plantenergy.uwa.edu.au).
Abbreviations: FP, fluorescent protein; ER, endoplasmic reticulum; PM, plasma membrane.