Table 3.
Discovery Set a | Validation Set a | |||||||||
---|---|---|---|---|---|---|---|---|---|---|
SNP | Chr | Position | Gene | Alleleb | Location | MAFc | ORd (95% CI) | P-value | ORd (95% CI) | P-value |
rs625145 | 11 | 116233146 | SIK3 | A/T | Intron | 0.26/0.19 | 1.64 (1.19-2.28) | 0.0028 | 1.52 (1.04-2.22) | 0.029 |
rs2093266 | 14 | 94102540 | SERPINA4 | G/A | Intron | 0.07/0.13 | 0.53 (0.34-0.82) | 0.0042 | 0.55 (0.32-0.95) | 0.031 |
rs1955656 | 14 | 94115128 | SERPINA5 | G/A | 5′ UTR | 0.07/0.13 | 0.52 (0.33-0.81) | 0.0037 | 0.57 (0.33-0.97) | 0.037 |
rs8094315 | 18 | 59087027 | BCL2 | A/G | Intron | 0.17/0.25 | 0.62 (0.45-0.85) | 0.0032 | 0.61 (0.41-0.91) | 0.016 |
rs12457893 | 18 | 59077141 | BCL2 | A/C | Intron | 0.42/0.51 | 0.68 (0.52-0.88) | 0.0034 | 0.71 (0.53-0.96) | 0.026 |
Definition of abbreviations: SNP=single nucleotide polymorphism; Chr=chromosome; MAF=minor allele frequency; OR=odds ratio; CI=confidence interval; UTR=untranslated region; BCL2=B-cell CLL/lymphoma 2 gene; SIK3=salt-inducible kinase family 3 gene; SERPINA4= serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 4 gene; SERPINA5= serpin peptidase inhibitor, clade A (alpha-1 antiproteinase, antitrypsin), member 5 gene; APACHE=Acute Physiology and Chronic Health Evaluation.
Adjusted for age, gender, and APACHE III score.
Major allele / minor allele.
Cases/controls.
Odds ratios are for each additional copy of the minor allele.