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. Author manuscript; available in PMC: 2013 Jun 24.
Published in final edited form as: Osteoporos Int. 2010 Dec 9;22(4):1079–1090. doi: 10.1007/s00198-010-1296-0

Table 1.

Candidate Genes Screened for Association in the Discovery Sample.

Chr1 DVL1, TNFRSF1B, PAX7, ALPL, WNT4, ID3, CSF3R, LEPR, TGFBR3, ERBP, CSF1, HSD3B2, HSD3B1, NOTCH2, GNRHR2,
CTSK, IL6R, ZFP67, BGLAP1, MEF2D, NTRK1, RXRG, ADIPOR1, MYOG, HSD11B1, TGFB2, WNT9A, WNT3A
Chr2 ID2, NCOA1, POMC, LTBP1, CYP1B1, LHCGR, PPP3R1, IL1R2, IL1R1, IL1A, IL1B, IL1RN, EN1, GLI2, LCT, NR4A2, TANK,
DLX1, DLX2, ATF2, HOXD13, HOXD12, HOXD11, HOXD10, HOXD9, HOXD8, HOXD4, HOXD3, HOXD1, FRZB, GDF8,
STAT1, CASP8, FZD7, BMPR2, FZD5, IGFBP2, IGFBP5, WNT10A, IHH, PAX3, IRS1, TWIST2
Chr3 IRAK2, GHRL, PPARG, WNT7A, THRB, TGFBR2, MYD88, ACVR2B, CTNNB1, PTHR1, WNT5A, POU1F1, GSK3B, CASR,
GATA2, TRH, SHOX2, GHSR, TNFSF10, CHRD, AHSG, ACDC, OSTN, HES1
Chr4 FGFR3, MSX1, BAPX1, PPARGC1A, KDR, GNRHR, GC, BMP2K, BMP3, DMP1, IBSP, MEPE, SPP1, BMPR1B, NFKB1,
DKK2, LEF1, EGF, FGF2, SMAD1, SFRP2, CASP3
Chr5 LIFR, PTGER4, GHR, FST, IL6ST, MAP3K1, CRHBP, MEF2C, APC, HSD17B4, CSF2, PDLIM4, TCF7, HDAC3, FGF1,
NR3C1, CSF1R, SPARC, FGF18, MSX2, PROP1
Chr6 RIPK1, SOX4, TNFA, CYP21A2, RXRB, PPARD, MAPK14, CDKN1A, VEGF, RUNX2, OSTM1, WISP3, ENPP1, CTGF,
TNFAIP3, ESR1, IGF2R
Chr7 TWIST, IL6, GPNMB, HOXA1, HOXA2, HOXA3, HOXA4, HOXA5, HOXA6, HOXA7, HOXA9, HOXA10, HOXA11, HOXA13,
CRHR2, GHRHR, SFRP4, GLI3, IGFBP1, IGFBP3, EGFR, FZD1, CDK6, CALCR, DLX6, DLX5, CYP3A4, LEP, SMO, NRF1,
PTN, TRPV5, CASP2, SHH
Chr8 EGR3, TNFRSF10A, GNRH1, STAR, FGFR1, SFRP1, IKBKB, DKK4, CRH, NCOA2, HEY1, TIEG, FZD6, EXT1, TNFRSF11B,
FBXO32, WISP1, CYP11B1
Chr9 CER1, IFNB1, CNTFR, OSTF1, NTRK2, ROR2, OGN, PTCH, HSD17B3, TGFBR1, TLR4, TRAF1, WDR5, RXRA, NOTCH1,
TRAF2
Chr10 DKK1, EGR2, BMPR1A, CHUK, CYP17A1, FGFR2
Chr11 IGF2, CDKN1C, DKK3, PTH, CALCA, SOX6, MYOD1, BDNF, TRAF6, EXT2, CNTF, ESRRA, LTBP3, FOSL1, TCIRG1, LRP5,
CCND1, FGF3, FADD, CHRDL2, ARRB1, WNT11, FZD4
Chr12 WNT5B, ADIPOR2, FGF23, NTF3, TNFRSF1A, LRP6, MGP, SOX5, PTHLH, VDR, WNT10B, WNT1, IGFBP6, SP7,
CYP27B1, WIF1, IRAK3, MYF6, MYF5, DCN, IGF1, TBX3, TCF1, P2RX7
Chr13 FLT1, KL, POSTN, TNFSF11
Chr14 NFKBIA, PAX9, BMP4, ESR2, LTBP2, FOS, TGFB3, TSHR, DLK1, AKT1
Chr15 CKTSF1B1, CYP19A1, MAP2K1, SMAD3, CYP11A1, CYP1A1, CYP1A2, NTRK3, IGF1R, MEF2A
Chr16 AXIN1, CLCN7, IGFALS, MAPK3, RBL2, CBFB, TRADD, HSD17B2, FOXC2
Chr17 ALOX15, ARRB2, DVL2, SHBG, PI3K, G-CSF, THRA, IGFBP4, HSD17B1, SOST, MAP3K14, CRHR1, PHOSPHO1, DLX3,
COL1A1, TOB1, NOG, TBX2, TBX4, GH1, SOX9
Chr18 MC2R, SMAD2, SMAD4, TCF4, TNFRSF11A, BCL2, NFATC1
Chr19 GPR54, MAP2K2, MEF2B, CEBPA, NFKBIB, DLL3, AKT2, TGFB1, FOSB, BAX, LHB, OSCAR
Chr20 GNRH2, BMP2, JAG1, PAX1, ID1, E2F1, GDF5, RBL1, GHRH, SRC, WISP2, MMP9, NCOA3, CEBPB, CYP24A1, BMP7
Chr21 IFNAR2, IFNAR1, RUNX1, ETS2
Chr22 COMT, KREMEN1, LIF, CSF2RB, ATF4, GPR24, PPARA
X Chr STS, RPS6KA3, GATA1, AR, BGN, IRAK1, IKBKG

Gene symbols are presented by chromosome in order across the given chromosome.