Table 1.

Comparison of models of 15 transmembrane domains built by Memoir (high-accuracy model), HHpred and Swiss-Model

Target/template	% id	% Cova	RMSDb
			Memoir	HHpred	Swiss-Model
2Q7MC/2H8AA	10	57	4.07	3.63	3.76
2JMMA/2LHFA	13	62	3.85	3.85	5.29
3GIAA/3L1LA	15	93	3.97	4.20	4.81
3O0RB/3MK7A	18	92	3.18	2.64	2.91
1OGVM/2AXTa	19	59	2.60	5.06	3.39
2VL0A/3RHWA	22	93	2.61	2.58	2.64
3BRYA/3DWOX	23	84	4.25	3.67	3.55
2WIEA/2X2VA	27	80	1.31	1.47	1.31
1YC9A/3PIKA	27	89	1.35	2.16	1.35
2D57A/2W2EA	31	97	1.80	2.06	2.02
2HYDA/3B60A	34	94	2.31	2.97	2.33
1L0LD/1ZRTD	35	89	1.30	1.54	1.28
1EZVE/2FYNC	47	65	2.11	3.72	3.01
1M56C/1OCCC	48	99	1.10	2.33	2.04
2QKSA/3SYOA	50	90	2.72	2.58	3.15
	Mean	83	2.57	2.96	2.86

An entry is in bold if the RMSD for the method is >0.2 Å lower than that of the next most accurate method.

^aCoverage is assessed over the transmembrane domain.

^bRMSD is assessed over common residues in all the models in the transmembrane domain.