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. Author manuscript; available in PMC: 2014 Jan 1.
Published in final edited form as: Methods Mol Biol. 2013;972:121–139. doi: 10.1007/978-1-60327-337-4_8

Figure 1.

Figure 1

Results in sensitivity, specificity and false discovery rate when the network structure is misspecified for four different sets of simulations corresponding to different proportions of DE genes. ▽: randomly deleting 10%, 30% and 50% of the true edges of the network; △: randomly adding approximately 801 (10%), 2403 (30%) and 4005 (50%) new edges to the network; □: randomly choosing 90%, 70% and 50% of the true edges and randomly adding 10%, 30% and 50% new edges to the network. The dashed line represents results without using the network structures.